Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: isoprenoid biosynthetic process

Term: GO:0008299  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene35311 SustainPine v3.0 152
• AutoFact: Probable acetyl-CoA acetyltransferase, cytosolic 2 n=5 Tax=Arabidopsis RepID=THIC2_ARATH 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acetyl-CoA acetyltransferase, cytosolic 1 7.569e-13
Internal
sp_v3.0_unigene36713 SustainPine v3.0 2229
• AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Ginkgo biloba RepID=Q5XQC9_GINBI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Complete
sp_v3.0_unigene37442 SustainPine v3.0 909
• AutoFact: Geranylgeranyl diphosphate synthase n=1 Tax=Ginkgo biloba RepID=Q64KQ5_GINBI 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Geranylgeranyl pyrophosphate synthase 0.0
Complete
sp_v3.0_unigene37733 SustainPine v3.0 1662
• AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Taxus x media RepID=Q6WP38_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
C-terminus
sp_v3.0_unigene39034 SustainPine v3.0 433
• AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Taxus x media RepID=Q6WP38_9CONI 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 6.479e-40
N-terminus
sp_v3.0_unigene43472 SustainPine v3.0 205
• AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase (Fragment) n=1 Tax=Malus x domestica RepID=Q93WT5_MALDO 7.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Internal
sp_v3.0_unigene44762 SustainPine v3.0 253
• AutoFact: Probable acetyl-CoA acetyltransferase, cytosolic 2 n=5 Tax=Arabidopsis RepID=THIC2_ARATH 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acetyl-CoA acetyltransferase, cytosolic 1 9.259e-13
Internal
sp_v3.0_unigene44773 SustainPine v3.0 244
• AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Ginkgo biloba RepID=Q5XQC9_GINBI 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Internal
sp_v3.0_unigene45710 SustainPine v3.0 459
• AutoFact: Thiolase_C domain containing protein 1.0e-08
• Sma3: Acetyl-CoA acetyltransferase, cytosolic 1 6.203e-13
unknown
sp_v3.0_unigene46012 SustainPine v3.0 1372
• AutoFact: putative lysine ketoglutarate reductase trans-splicing related 1 [Oryza sativa Japonica Group] dbj|BAD82335.1| putative lysine ketoglutarate reductase trans-splicing related 1 [Oryza sativa Japonica Group] 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Lysine ketoglutarate reductase trans-splicing related 1 1.489e-11
Putative C-terminus
sp_v3.0_unigene46179 SustainPine v3.0 819
• AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase [Ginkgo biloba] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Internal
sp_v3.0_unigene49322 SustainPine v3.0 264
• AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Ginkgo biloba RepID=Q5XQC9_GINBI 7.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 1.893e-23
Internal
sp_v3.0_unigene50575 SustainPine v3.0 628
• AutoFact: Acetyl-CoA acetyltransferase n=1 Tax=Ectocarpus siliculosus RepID=D7G8S8_ECTSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acetyl-CoA acetyltransferase, cytosolic 1 1.042e-12
Internal
sp_v3.0_unigene50674 SustainPine v3.0 212
• AutoFact: Hydroxymethylglutaryl-CoA reductase n=1 Tax=Hevea brasiliensis RepID=A9ZMZ8_HEVBR 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Internal
sp_v3.0_unigene51436 SustainPine v3.0 635
• AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Taxus x media RepID=Q6WP38_9CONI 4.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 0.0
C-terminus
sp_v3.0_unigene51826 SustainPine v3.0 494
• AutoFact: Geranyl diphosphate synthase n=1 Tax=Abies grandis RepID=Q8LKJ2_ABIGR 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Geranylgeranyl pyrophosphate synthase 0.0
C-terminus
sp_v3.0_unigene51922 SustainPine v3.0 460
• AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Taxus x media RepID=Q6WP38_9CONI 9.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 3.856e-10
Internal
sp_v3.0_unigene55362 SustainPine v3.0 213
• AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase [Taxus x media] 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene57463 SustainPine v3.0 173
• AutoFact: Squalene synthase n=1 Tax=Taxus cuspidata RepID=A9NJG0_TAXCU 3.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Squalene synthase 2.298e-30
Internal
sp_v3.0_unigene62481 SustainPine v3.0 157
• AutoFact: 1-deoxy-D-xylulose 5-phosphate reductoisomerase n=3 Tax=Pinaceae RepID=C6ZG57_PINTA 1.0e-07
• FL-Next: tr=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Pinus taeda (Loblolly pine). 0.0
• Sma3: 1-deoxy-D-xylulose-5-phosphate reductoisomerase 4.167e-24
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain