Sustainpine_db
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Name: nucleotide binding

Term: GO:0000166  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene8460 SustainPine v3.0 1534
AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene8514 SustainPine v3.0 2865
AutoFact: Heterogeneous nuclear ribonucleoprotein 27C, putative n=1 Tax=Ricinus communis RepID=B9SQV8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene8541 SustainPine v3.0 1770
AutoFact: U1 small nuclear ribonucleoprotein 70 kDa, putative n=1 Tax=Ricinus communis RepID=B9S6I9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U1 snRNP 5.237e-09
N-terminus
sp_v3.0_unigene8715 SustainPine v3.0 1060
AutoFact: TPX2 (targeting protein for Xklp2) family protein [Arabidopsis thaliana] gb|AED92170.1| TPX2 (targeting protein for Xklp2) family protein [Arabidopsis thaliana] 9.0e-27
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Targeting protein for Xklp2 containing protein, expressed 2.995e-08
Putative Complete
sp_v3.0_unigene8728 SustainPine v3.0 2371
AutoFact: sarcoplasmic reticulum protein-like protein [Oryza sativa Japonica Group] gb|AAS07364.1| sarcoplasmic reticulum protein (with alternative splicing) [Oryza sativa Japonica Group] gb|ABF99835.1| RNA-binding protein Luc7-like 2, putative, expressed [Oryza sa 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene8861 SustainPine v3.0 2635
AutoFact: polypyrimidine tract-binding-like [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative polypyrimidine tract-binding protein 9.453e-09
Complete
sp_v3.0_unigene8863 SustainPine v3.0 1513
AutoFact: splicing factor [Arabidopsis thaliana] 0.0
FL-Next: sp=Arginine/serine-rich-splicing factor RSP31; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Arginine/serine-rich splicing factor RSP41 2.678e-16
Complete
sp_v3.0_unigene8907 SustainPine v3.0 312
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] gb|AAK76494.1| putative helicase [Arabidopsis thaliana] gb|AAM15033.1| putative helicase [Arabidopsis thaliana] gb|AAD17447.2| putative helicase [Arabidopsis thaliana] gb|AAM14300.1| putative helicase [A 9.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene9206 SustainPine v3.0 764
AutoFact: DNA-binding protein smubp-2, putative n=1 Tax=Ricinus communis RepID=B9SDE3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene9389 SustainPine v3.0 2853
AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Misassembled
sp_v3.0_unigene9466 SustainPine v3.0 1147
AutoFact: Unassigned protein
FL-Next: sp=Desiccation-related protein PCC13-62; Craterostigma plantagineum (Blue gem) (Torenia plantagineum). 0.0
Sma3: Desiccation-related protein PCC13-62, putative 4.502e-14
Complete
sp_v3.0_unigene9595 SustainPine v3.0 1533
AutoFact: Splicing factor-like protein n=3 Tax=Vitis RepID=Q6R4Q7_VITRI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene9606 SustainPine v3.0 428
AutoFact: origin recognition complex subunit 4 [Zea mays] gb|AAL10455.1|AF417484_1 origin recognition complex subunit 4 [Zea mays] 6.0e-26
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative N-terminus
sp_v3.0_unigene9720 SustainPine v3.0 2148
AutoFact: nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana] dbj|BAB09056.1| unnamed protein product [Arabidopsis thaliana] gb|AAL86001.1| unknown protein [Arabidopsis thaliana] gb|AAM45065.1| unknown protein [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-GTPase-activating protein-binding protein, putative 7.485e-09
Complete
sp_v3.0_unigene9748 SustainPine v3.0 1831
AutoFact: replication factor C 38 kDa subunit [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene9786 SustainPine v3.0 1985
AutoFact: DNA binding protein ACBF-like [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene9791 SustainPine v3.0 1034
AutoFact: putative ethylene-responsive RNA helicase [Oryza sativa Japonica Group] 5.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 30 3.81e-08
Putative C-terminus
sp_v3.0_unigene9805 SustainPine v3.0 1999
AutoFact: bZIP_2 domain containing protein 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative Complete
sp_v3.0_unigene9893 SustainPine v3.0 2344
AutoFact: heterogeneous nuclear ribonucleoprotein r [Aedes aegypti] gb|EAT45899.1| heterogeneous nuclear ribonucleoprotein r [Aedes aegypti] 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene9945 SustainPine v3.0 3307
AutoFact: Raffinose_syn domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seed imbibition protein 9.15e-15
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain