Sustainpine_db
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Name: nucleotide binding

Term: GO:0000166  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1820 SustainPine v3.0 838
AutoFact: Drf_FH1 multi-domain protein 6.0e-18
coding
sp_v3.0_unigene1868 SustainPine v3.0 2576
AutoFact: U1 small nuclear ribonucleoprotein 70 kDa, putative n=1 Tax=Ricinus communis RepID=B9S6I9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: U1 snRNP 3.506e-09
Complete
sp_v3.0_unigene1869 SustainPine v3.0 2047
AutoFact: putative U1 snRNP 70K protein [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U1 snRNP 9.17e-09
Putative Complete
sp_v3.0_unigene1887 SustainPine v3.0 2829
AutoFact: DNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SXI7_PHYPA 0.0
FL-Next: sp=DNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: DNA polymerase 1.099e-23
C-terminus
sp_v3.0_unigene1910 SustainPine v3.0 3709
AutoFact: tobacco nucleolin [Nicotiana tabacum] 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene1927 SustainPine v3.0 1075
AutoFact: 15.9 kDa subunit of RNA polymerase II n=8 Tax=core eudicotyledons RepID=O48890_ARATH 1.4013e-45
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene1928 SustainPine v3.0 1002
AutoFact: 15.9 kDa subunit of RNA polymerase II n=8 Tax=core eudicotyledons RepID=O48890_ARATH 0.0
FL-Next: tr=RPB15.9; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Complete
sp_v3.0_unigene2029 SustainPine v3.0 1620
AutoFact: strictosidine synthase-like 3 [Arabidopsis thaliana] gb|AAL31926.1|AF419594_1 At1g08470/T27G7_9 [Arabidopsis thaliana] gb|AAL36403.1| unknown protein [Arabidopsis thaliana] gb|AAM51389.1| unknown protein [Arabidopsis thaliana] gb|AEE28296.1| strictosidine 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative strictosidine synthase 9.47e-29
Complete
sp_v3.0_unigene2036 SustainPine v3.0 826
AutoFact: Protein terminal ear1 homolog n=2 Tax=Oryza sativa RepID=EAR1_ORYSJ 4.0e-16
FL-Next: sp=Protein terminal ear1 homolog; Oryza sativa subsp. indica (Rice). 0.0
C-terminus
sp_v3.0_unigene2151 SustainPine v3.0 2937
AutoFact: poly(A)-binding protein [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Poly(A)-binding protein 6.971e-34
Complete
sp_v3.0_unigene2162 SustainPine v3.0 1007
AutoFact: GTP1/OBG family protein [Arabidopsis thaliana] gb|AAM91598.1| GTP-binding protein obg-like [Arabidopsis thaliana] gb|AAP37780.1| At5g18570 [Arabidopsis thaliana] gb|AED92580.1| GTP1/OBG family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene2175 SustainPine v3.0 877
AutoFact: nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana] dbj|BAB09056.1| unnamed protein product [Arabidopsis thaliana] gb|AAL86001.1| unknown protein [Arabidopsis thaliana] gb|AAM45065.1| unknown protein [Arab 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chloroplast unusual positioning 1B 4.959e-09
Putative N-terminus
sp_v3.0_unigene2200 SustainPine v3.0 511
AutoFact: CCR4-NOT transcription complex subunit 4 [Arabidopsis thaliana] emb|CAB75492.1| putative protein [Arabidopsis thaliana] gb|AEE78053.1| CCR4-NOT transcription complex subunit 4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene2231 SustainPine v3.0 1613
AutoFact: U1snRNP-specific protein, U1A n=1 Tax=Solanum tuberosum RepID=Q41498_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Spliceosomal protein 6.743e-09
Complete
sp_v3.0_unigene2233 SustainPine v3.0 1879
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AEE35845.1| RNA recognition motif-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RNA-binding region-containing protein, putative 4.018e-15
Complete
sp_v3.0_unigene2336 SustainPine v3.0 587
AutoFact: FAP multi-domain protein 2.0e-15
Sma3: Anther-specific proline rich protein 1.837e-06
coding
sp_v3.0_unigene2366 SustainPine v3.0 2086
AutoFact: Calmodulin binding protein, putative n=1 Tax=Ricinus communis RepID=B9T1E0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calmodulin binding protein, putative 1.323e-17
Complete
sp_v3.0_unigene2484 SustainPine v3.0 1298
AutoFact: DNA polymerase n=1 Tax=Populus trichocarpa RepID=B9HHA9_POPTR 0.0
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA polymerase 5.732e-20
Internal
sp_v3.0_unigene2540 SustainPine v3.0 1386
AutoFact: RNA-binding protein [Medicago truncatula] 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene2574 SustainPine v3.0 2466
AutoFact: RNA recognition motif and CCHC-type zinc finger domain-containing protein [Arabidopsis thaliana] gb|AAL11606.1|AF424613_1 AT3g26420/F20C19_14 [Arabidopsis thaliana] dbj|BAB02203.1| unnamed protein product [Arabidopsis thaliana] gb|AAK96804.1| Unknown prot 6.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain