Sustainpine_db
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Name: nucleotide binding

Term: GO:0000166  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene56 SustainPine v3.0 2179
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.569e-23
C-terminus
sp_v3.0_unigene138 SustainPine v3.0 3993
AutoFact: putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana] 0.0
FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: RNA-directed RNA polymerase 3.257e-20
Complete
sp_v3.0_unigene147 SustainPine v3.0 2292
AutoFact: DNA polymerase n=2 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MMP0_ARALL 0.0
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA polymerase 3.052e-14
C-terminus
sp_v3.0_unigene188 SustainPine v3.0 1388
AutoFact: putative phosphate/phosphoenolpyruvate translocator protein [Arabidopsis thaliana] sp|Q9SKJ7.1|PT225_ARATH RecName: Full=Probable sugar phosphate/phosphate translocator At2g25520 gb|AAD20711.1| putative phosphate/phosphoenolpyruvate translocator protein [ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Plastidic phosphate translocator-like protein1 1.721e-10
Complete
sp_v3.0_unigene195 SustainPine v3.0 3806
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AAM65738.1| RNA binding protein, putativ 8.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycine-rich RNA-binding protein 2.597e-27
Complete
sp_v3.0_unigene199 SustainPine v3.0 2299
AutoFact: poly(A)-binding protein [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Poly(A)-binding protein 6.971e-34
Complete
sp_v3.0_unigene228 SustainPine v3.0 1744
AutoFact: Os05g0427300 protein n=2 Tax=Oryza sativa RepID=Q0DI02_ORYSJ 4.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RNA recognition motif-containing protein 3.576e-11
Complete
sp_v3.0_unigene241 SustainPine v3.0 1733
AutoFact: pre-mRNA processing factor [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pre-mrna splicing factor 4.959e-09
N-terminus
sp_v3.0_unigene247 SustainPine v3.0 2665
AutoFact: Os01g0367300 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5JJM4_ORYSJ 8.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene319 SustainPine v3.0 2656
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAM10328.1| At2g44720/F16B22.21 [Arabidopsis thaliana] gb|AAN18203.1| At2g44720/F16B22.21 [Arabidopsis thaliana] gb|AEC10458.1| RNA recognition motif-containing protein [Arabidopsis thalia 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein At2g44720 5.669e-09
Complete
sp_v3.0_unigene362 SustainPine v3.0 870
AutoFact: PRP38_assoc multi-domain protein 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative C-terminus
sp_v3.0_unigene400 SustainPine v3.0 1386
AutoFact: strictosidine synthase family protein [Arabidopsis thaliana] emb|CAC34495.1| putative strictosidine synthase-like [Arabidopsis thaliana] gb|AAT44971.1| At5g22020 [Arabidopsis thaliana] gb|ABF59040.1| At5g22020 [Arabidopsis thaliana] gb|AED92969.1| stricto 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative strictosidine synthase 1.171e-25
Complete
sp_v3.0_unigene496 SustainPine v3.0 3131
AutoFact: putative heterogeneous nuclear ribonucleoprotein [Vitis vinifera] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene522 SustainPine v3.0 2624
AutoFact: Unassigned protein
FL-Next: sp=Zinc finger CCCH domain-containing protein 18; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene533 SustainPine v3.0 1620
AutoFact: Desiccation-related protein PCC13-62 precursor, putative [Medicago truncatula] 0.0
FL-Next: sp=Desiccation-related protein PCC13-62; Craterostigma plantagineum (Blue gem) (Torenia plantagineum). 0.0
Sma3: Desiccation-related protein PCC13-62, putative 3.178e-14
Complete
sp_v3.0_unigene794 SustainPine v3.0 2511
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AEE35845.1| RNA recognition motif-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RNA-binding region-containing protein, putative 5.489e-11
Complete
sp_v3.0_unigene834 SustainPine v3.0 3347
AutoFact: RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana] gb|AEE75227.1| RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana] 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene873 SustainPine v3.0 1436
AutoFact: putative arginine/serine-rich splicing factor [Medicago sativa subsp. x varia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Splicing factor, arginine/serine-rich 2 7.149e-16
Complete
sp_v3.0_unigene925 SustainPine v3.0 2574
AutoFact: Ninja-family protein AFP3 [Arabidopsis thaliana] ref|NP_001030794.1| Ninja-family protein AFP3 [Arabidopsis thaliana] ref|NP_001078222.1| Ninja-family protein AFP3 [Arabidopsis thaliana] sp|Q94F39.1|AFP3_ARATH RecName: Full=Ninja-family protein AFP3; AltN 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene1036 SustainPine v3.0 1886
AutoFact: Putative RRM-containing protein SEB-4 n=3 Tax=Poaceae RepID=Q5N8W4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain