Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: vesicle-mediated transport

Term: GO:0016192  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene61765 SustainPine v3.0 192
AutoFact: beta-adaptin-like protein B [Arabidopsis thaliana] sp|Q9SUS3.1|APBLB_ARATH RecName: Full=Beta-adaptin-like protein B; Short=At-bB-Ad; Short=At-betaB-Ad; AltName: Full=AP complex subunit beta-B; AltName: Full=Adaptor protein complex AP subunit beta-B; AltN 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene61795 SustainPine v3.0 191
AutoFact: coatomer subunit delta [Arabidopsis thaliana] ref|NP_001031836.1| coatomer subunit delta [Arabidopsis thaliana] sp|Q93Y22.2|COPD_ARATH RecName: Full=Coatomer subunit delta; AltName: Full=Delta-coat protein; Short=Delta-COP gb|AAK96656.1| coatomer delta su 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene62878 SustainPine v3.0 243
AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 1.0e-17
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 1.042e-12
Internal
sp_v3.0_unigene63287 SustainPine v3.0 137
AutoFact: Syntaxin, plant, putative n=1 Tax=Ricinus communis RepID=B9RGU3_RICCO 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene63898 SustainPine v3.0 179
AutoFact: Alpha-COP n=1 Tax=Chlamydomonas reinhardtii RepID=A8HRR9_CHLRE 1.0e-26
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Coatomer subunit alpha-2 2.364e-08
Putative N-terminus
sp_v3.0_unigene63912 SustainPine v3.0 136
AutoFact: Vesicle coat complex COPI, alpha subunit n=1 Tax=Ectocarpus siliculosus RepID=D8LL95_ECTSI 2.0e-17
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Coatomer subunit alpha-2 2.364e-08
Internal
sp_v3.0_unigene64247 SustainPine v3.0 184
AutoFact: COP alpha homolog (Fragment) n=1 Tax=Triticum aestivum RepID=Q9FVJ9_WHEAT 8.0e-06
FL-Next: sp=Coatomer subunit alpha-3; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene64622 SustainPine v3.0 265
AutoFact: Syntaxin, plant, putative n=1 Tax=Ricinus communis RepID=B9S229_RICCO 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Qa-SNARE, SYP2/Pep12p/Syntaxin 7-type 2.487e-12
Internal
sp_v3.0_unigene64812 SustainPine v3.0 130
AutoFact: Beta-COP-like protein [Arabidopsis thaliana] emb|CAB79867.1| Beta-COP-like protein [Arabidopsis thaliana] 1.0e-08
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta-2 6.743e-09
Internal
sp_v3.0_unigene64819 SustainPine v3.0 208
AutoFact: AP-3 complex subunit delta [Arabidopsis thaliana] ref|NP_849785.1| AP-3 complex subunit delta [Arabidopsis thaliana] ref|NP_001031156.1| AP-3 complex subunit delta [Arabidopsis thaliana] sp|Q9C744.1|AP3D_ARATH RecName: Full=AP-3 complex subunit delta; Alt 4.0e-12
FL-Next: sp=AP-3 complex subunit delta; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene64924 SustainPine v3.0 116
AutoFact: Coatomer protein complex subunit beta 2 (Fragment) n=1 Tax=Medicago sativa RepID=Q45NL8_MEDSA 4.0e-10
FL-Next: sp=Coatomer subunit beta'-1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Coatomer subunit beta'-2 2.868e-08
Internal
sp_v3.0_unigene65750 SustainPine v3.0 167
AutoFact: Nonclathrin coat protein zeta2-COP n=1 Tax=Solanum lycopersicum RepID=Q9MAZ6_SOLLC 4.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65968 SustainPine v3.0 153
AutoFact: Unassigned protein 3.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene66021 SustainPine v3.0 220
AutoFact: AP-1 Golgi-related complex component; clathrin coated vesicles; clathrin assembly protein [Camptotheca acuminata] 1.0e-19
FL-Next: sp=AP-1 complex subunit sigma-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Clathrin coat assembly protein ap19, putative 5.596e-09
C-terminus
sp_v3.0_unigene66038 SustainPine v3.0 407
AutoFact: pfam00847, AP2, AP2 domain 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 0.0
N-terminus
sp_v3.0_unigene66467 SustainPine v3.0 418
AutoFact: Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group n=1 Tax=Physcomitrella patens subsp. patens RepID=UPI000161FEA5 8.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene67442 SustainPine v3.0 167
AutoFact: Unassigned protein
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta-2 4.107e-09
Internal
sp_v3.0_unigene68033 SustainPine v3.0 217
AutoFact: Salt-inducible protein (Fragment) n=3 Tax=Papilionoideae RepID=O04137_MEDSA 2.0e-12
FL-Next: sp=AP-1 complex subunit sigma-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Clathrin coat assembly protein ap19, putative 3.223e-09
C-terminus
sp_v3.0_unigene68798 SustainPine v3.0 184
AutoFact: Putative clathrin-associated adaptor protein [Arabidopsis thaliana] 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene69735 SustainPine v3.0 180
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Syntaxin, putative 4.541e-08
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain