Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: vesicle-mediated transport

Term: GO:0016192  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene55015 SustainPine v3.0 392
• AutoFact: ADP-ribosylation factor A1E [Arabidopsis thaliana] ref|NP_001190161.1| ADP-ribosylation factor A1E [Arabidopsis thaliana] ref|NP_001190162.1| ADP-ribosylation factor A1E [Arabidopsis thaliana] ref|XP_002880284.1| ADP-ribosylation factor A1E [Arabidopsis l 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP-ribosylation factor 9.086e-30
C-terminus
sp_v3.0_unigene55506 SustainPine v3.0 437
• AutoFact: Retrotransposon protein, putative, unclassified n=5 Tax=Oryza sativa RepID=Q2QQD0_ORYSJ 6.0e-28
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 2.475e-09
Internal
sp_v3.0_unigene55571 SustainPine v3.0 321
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 8.0e-28
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 3.442e-33
Internal
sp_v3.0_unigene55895 SustainPine v3.0 348
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q94LP8_ORYSJ 3.0e-21
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 7.228e-11
Internal
sp_v3.0_unigene56109 SustainPine v3.0 379
• AutoFact: alpha-adaptin C homolog [Arabidopsis thaliana] 5.0e-35
• FL-Next: Isoform 3 of AP-2 complex subunit alpha-1 OS=Arabidopsis thaliana GN=ALPHA-ADR 0.0
• Sma3: Alpha-adaptin 3.157e-08
Internal
sp_v3.0_unigene57524 SustainPine v3.0 422
• AutoFact: ADP-ribosylation factor [Hyacinthus orientalis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP-ribosylation factor 1.051e-26
Putative N-terminus
sp_v3.0_unigene57546 SustainPine v3.0 247
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2R2N6_ORYSJ 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.329e-12
Putative Complete
sp_v3.0_unigene57822 SustainPine v3.0 397
• AutoFact: pfam03208, PRA1, PRA1 family protein 7.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene58633 SustainPine v3.0 255
• AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Ginkgo biloba RepID=Q9ARL0_GINBI 8.0e-35
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene59171 SustainPine v3.0 358
• AutoFact: Alpha-soluble nsf attachment protein, putative n=1 Tax=Ricinus communis RepID=B9S4A1_RICCO 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-soluble NSF attachment protein 3.403e-19
N-terminus
sp_v3.0_unigene59205 SustainPine v3.0 378
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 2.99878e-43
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene59603 SustainPine v3.0 316
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.142e-25
Putative Complete
sp_v3.0_unigene59871 SustainPine v3.0 344
• AutoFact: Pyruvate kinase n=2 Tax=Picea sitchensis RepID=B8LL81_PICSI 7.0e-34
• FL-Next: sp=Pyruvate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pyruvate kinase 0.0
Internal
sp_v3.0_unigene60124 SustainPine v3.0 230
• AutoFact: ADP-ribosylation factor [Oryza sativa Japonica Group] 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP-ribosylation factor 1.397e-27
N-terminus
sp_v3.0_unigene60475 SustainPine v3.0 456
• AutoFact: coatomer alpha subunit-like protein [Lotus japonicus] 1.0e-14
• FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Coatomer subunit alpha-2 2.364e-08
N-terminus
sp_v3.0_unigene60697 SustainPine v3.0 267
• AutoFact: Clathrin assembly protein AP19, putative n=1 Tax=Plasmodium chabaudi RepID=Q4X2E6_PLACH 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Clathrin coat assembly protein ap19, putative 4.425e-09
C-terminus
sp_v3.0_unigene60782 SustainPine v3.0 223
• AutoFact: Coatomer alpha subunit-like protein n=2 Tax=Lotus japonicus RepID=Q70I39_LOTJA 8.0e-09
• FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene60895 SustainPine v3.0 173
• AutoFact: putative coatmer beta subunit [Fragaria x ananassa] 3.0e-15
• FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Coatomer subunit beta-2 6.195e-09
Internal
sp_v3.0_unigene61066 SustainPine v3.0 182
• AutoFact: coatomer subunit alpha-2 [Arabidopsis thaliana] sp|Q9SJT9.1|COPA2_ARATH RecName: Full=Coatomer subunit alpha-2; AltName: Full=Alpha-coat protein 2; Short=Alpha-COP 2 gb|AAD23699.1| coatomer alpha subunit [Arabidopsis thaliana] dbj|BAF00596.1| coatomer alp 1.0e-19
• FL-Next: sp=Coatomer subunit alpha-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Coatomer subunit alpha-2 2.409e-08
Internal
sp_v3.0_unigene61349 SustainPine v3.0 327
• AutoFact: Unassigned protein
• FL-Next: tr=Disease resistance protein; pekinensis). 0.0
• Sma3: Polyprotein 7.125e-14
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain