Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: vesicle-mediated transport

Term: GO:0016192  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene23821 SustainPine v3.0 1767
AutoFact: PREDICTED: similar to ADP-ribosylation factor 1 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000587A84 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ADP-ribosylation factor 1.369e-26
Complete
sp_v3.0_unigene24198 SustainPine v3.0 1736
AutoFact: Syntaxin 81, putative [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Syntaxin-81; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Syntaxin 81 2.116e-09
Complete
sp_v3.0_unigene24517 SustainPine v3.0 694
AutoFact: ADP-ribosylation factor [Hyacinthus orientalis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ADP-ribosylation factor 1.214e-29
Complete
sp_v3.0_unigene24614 SustainPine v3.0 831
AutoFact: ADP-ribosylation factor 6 [Xenopus (Silurana) tropicalis] gb|AAH76664.1| ADP-ribosylation factor 6 [Xenopus (Silurana) tropicalis] emb|CAJ83809.1| ADP-ribosylation factor 6 [Xenopus (Silurana) tropicalis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ADP-ribosylation factor 1.245e-29
Complete
sp_v3.0_unigene24963 SustainPine v3.0 385
AutoFact: Ethylene-responsive transcription factor ERF017 n=2 Tax=Arabidopsis RepID=ERF17_ARATH 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 5.95706e-41
N-terminus
sp_v3.0_unigene25230 SustainPine v3.0 1316
AutoFact: Synaptobrevin/VAMP-like protein n=2 Tax=Solanum RepID=F5C0F9_SOLCH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene25312 SustainPine v3.0 509
AutoFact: AP-1 complex subunit mu [Arabidopsis thaliana] gb|AAB71967.1| putative Clathrin Coat Assembly protein [Arabidopsis thaliana] gb|AAM20503.1| clathrin adaptor medium chain protein MU1B, putative [Arabidopsis thaliana] gb|AAN72155.1| clathrin adaptor medium 6.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Clathrin coat assembly protein ap-1, putative 3.449e-09
C-terminus
sp_v3.0_unigene25447 SustainPine v3.0 852
AutoFact: Auxin transporter-like protein 2 n=4 Tax=fabids RepID=LAX2_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin influx carrier component 2.283e-29
Putative C-terminus
sp_v3.0_unigene25555 SustainPine v3.0 1079
AutoFact: Dehydration-responsive element binding protein 3 n=1 Tax=Glycine max RepID=Q2VEU3_SOYBN 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 8.051e-27
Complete
sp_v3.0_unigene25794 SustainPine v3.0 380
AutoFact: PREDICTED: similar to clathrin coat assembly protein [Nasonia vitripennis] 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene25967 SustainPine v3.0 610
AutoFact: Zeta-cop, subunit of COP-I complex n=2 Tax=Chlamydomonadales RepID=A8JET7_CHLRE 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit zeta-1 4.336e-15
Complete
sp_v3.0_unigene26554 SustainPine v3.0 606
AutoFact: AP-1 complex subunit sigma-2 n=2 Tax=Dictyostelium RepID=AP1S2_DICDI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Clathrin coat assembly protein ap19, putative 2.819e-08
Complete
sp_v3.0_unigene27512 SustainPine v3.0 2022
AutoFact: ARF-GAP protein n=1 Tax=Phytolacca acinosa RepID=E7BQV8_PHYAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ARF GTPase activator, putative 7.767e-14
Complete
sp_v3.0_unigene29305 SustainPine v3.0 652
AutoFact: Syntaxin, putative n=1 Tax=Ricinus communis RepID=B9RFG2_RICCO 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Qa-SNARE, SYP4/Tlg2p/Syntaxin 16-type 6.823e-09
C-terminus
sp_v3.0_unigene29738 SustainPine v3.0 772
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene29908 SustainPine v3.0 1321
AutoFact: putative SNARE protein [Hevea brasiliensis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30005 SustainPine v3.0 475
AutoFact: Ras-related protein RABH1e n=4 Tax=Brassicaceae RepID=RAH1E_ARATH 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rab6/RabH-family small GTPase 4.264e-10
N-terminus
sp_v3.0_unigene30279 SustainPine v3.0 558
AutoFact: gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis thaliana] dbj|BAB03109.1| retroelement pol polyprotein [Arabidopsis thaliana] 5.0e-37
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Retrotransposon protein, putative, unclassified 7.425e-17
Internal
sp_v3.0_unigene30412 SustainPine v3.0 990
AutoFact: AP-2 complex subunit sigma [Arabidopsis thaliana] ref|XP_002894072.1| hypothetical protein ARALYDRAFT_891585 [Arabidopsis lyrata subsp. lyrata] sp|Q84WL9.1|AP2S_ARATH RecName: Full=AP-2 complex subunit sigma; AltName: Full=Adapter-related protein complex 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene31540 SustainPine v3.0 810
AutoFact: VAMP-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TZJ4_PHYPA 8.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: VAMP-like protein 7.797e-06
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain