Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: vesicle-mediated transport

Term: GO:0016192  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene185201 SustainPine v3.0 117
AutoFact: Syntaxin 81 n=6 Tax=Andropogoneae RepID=B6T3V6_MAIZE 4.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Syntaxin 81 6.626e-10
Internal
sp_v3.0_unigene185801 SustainPine v3.0 477
AutoFact: Methylenetetrahydrofolate reductase n=1 Tax=Picea sitchensis RepID=B8LKP0_PICSI 0.0
FL-Next: sp=Methylenetetrahydrofolate reductase; Pinus pinaster (Maritime pine). 0.0
Sma3: Methylenetetrahydrofolate reductase 5.98e-40
N-terminus
sp_v3.0_unigene186643 SustainPine v3.0 601
AutoFact: AP-3 complex subunit sigma-2 [Danio rerio] ref|NP_001187290.1| AP-3 complex subunit sigma-2 [Ictalurus punctatus] gb|AAH76269.1| Zgc:92795 [Danio rerio] gb|ADO28452.1| AP-3 complex subunit sigma-2 [Ictalurus punctatus] 3.99931e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative Clathrin Coat Assembly protein 1.091e-08
C-terminus
sp_v3.0_unigene186908 SustainPine v3.0 466
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 9.7e-21
Putative Complete
sp_v3.0_unigene187353 SustainPine v3.0 274
AutoFact: Unassigned protein
FL-Next: tr=RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Retrotransposon protein, putative, unclassified 9.658e-23
Internal
sp_v3.0_unigene188898 SustainPine v3.0 498
AutoFact: ADP-ribosylation factor [Pfiesteria piscicida] gb|ABI14194.1| ADP-ribosylation factor [Pfiesteria piscicida] gb|ABI14196.1| ADP-ribosylation factor [Pfiesteria piscicida] gb|ACU45061.1| ribosylation factor 1 [Pfiesteria piscicida] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ADP-ribosylation factor 9.321e-30
C-terminus
sp_v3.0_unigene189712 SustainPine v3.0 367
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Retrotransposon protein, putative, unclassified 3.533e-23
Internal
sp_v3.0_unigene191229 SustainPine v3.0 444
AutoFact: putative coatmer beta subunit (beta-coat protein) (beta-COP) [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 6.528e-13
Putative C-terminus
sp_v3.0_unigene192354 SustainPine v3.0 557
AutoFact: Glutamate-rich WD repeat-containing protein 1 n=1 Tax=Dictyostelium fasciculatum RepID=F4PW22_9MYCE 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene192510 SustainPine v3.0 444
AutoFact: Vesicleassociated membrane protein putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WL33_9STRA 5.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: R-SNARE protein, VAMP71-family 8.285e-06
C-terminus
sp_v3.0_unigene192655 SustainPine v3.0 430
AutoFact: ADP-ribosylation factor n=1 Tax=Karlodinium micrum RepID=A7YXV3_KARMI 5.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ADP-ribosylation factor 8.791e-19
C-terminus
sp_v3.0_unigene192825 SustainPine v3.0 561
AutoFact: longin domain-containing protein [Dictyostelium discoideum AX4] sp|Q54ES8.1|YKT6_DICDI RecName: Full=Putative synaptobrevin homolog YKT6; AltName: Full=Putative prenylated SNARE protein ykt6; Flags: Precursor gb|EAL61812.1| longin domain-containing protei 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene193129 SustainPine v3.0 398
AutoFact: RAB GTPase H1E [Arabidopsis thaliana] sp|Q9LFT9.1|RAH1E_ARATH RecName: Full=Ras-related protein RABH1e; Short=AtRABH1e emb|CAB96682.1| GTP-binding protein [Arabidopsis thaliana] gb|AED91514.1| RAB GTPase H1E [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rab6/RabH-family small GTPase 5.22e-10
Internal
sp_v3.0_unigene193330 SustainPine v3.0 506
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U389_PHYPA 0.0
FL-Next: sp=AP-4 complex subunit sigma; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene193370 SustainPine v3.0 460
AutoFact: AP-2 complex subunit sigma n=2 Tax=Dictyosteliida RepID=AP2S_DICDI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative clathrin assembly protein 4.793e-11
Putative Complete
sp_v3.0_unigene194084 SustainPine v3.0 284
AutoFact: Qa-SNARE, SYP4/Tlg2p/Syntaxin 16-type n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RUD3_PHYPA 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene194651 SustainPine v3.0 284
AutoFact: RecName: Full=Vacuolar protein sorting-associated protein 41 homolog gb|AAB60857.1| VPS41 [Solanum lycopersicum] 6.0e-23
FL-Next: sp=Vacuolar protein sorting-associated protein 41 homolog; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Sma3: Vacuolar protein sorting-associated protein 41 homolog 4.688e-09
Internal
sp_v3.0_unigene196224 SustainPine v3.0 546
AutoFact: coatomer alpha subunit-like protein [Lotus japonicus] 4.0e-10
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Coatomer subunit alpha-2 1.803e-08
Putative N-terminus
sp_v3.0_unigene199639 SustainPine v3.0 344
AutoFact: PREDICTED: similar to Clathrin, heavy polypeptide (Hc) n=1 Tax=Ciona intestinalis RepID=UPI000180C219 7.0e-34
FL-Next: sp=Clathrin heavy chain 2; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Clathrin heavy chain 3.93e-12
Internal
sp_v3.0_unigene199760 SustainPine v3.0 748
AutoFact: SNARE protein, putative [Magnaporthe oryzae 70-15] gb|EDJ96233.1| SNARE protein, putative [Magnaporthe oryzae 70-15] 0.0
FL-Next: sp=VAMP-like protein YKT62; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: VAMP-like protein YKT62 5.335e-08
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain