Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: vesicle-mediated transport

Term: GO:0016192  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene164694 SustainPine v3.0 277
• AutoFact: Small GTP-binding protein domain containing protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q231X2_TETTH 4.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP-ribosylation factor 8.921e-27
N-terminus
sp_v3.0_unigene165030 SustainPine v3.0 228
• AutoFact: beta-adaptin-like protein A [Arabidopsis thaliana] sp|Q9LDK9.1|APBLA_ARATH RecName: Full=Beta-adaptin-like protein A; Short=At-bA-Ad; Short=At-betaA-Ad; AltName: Full=AP complex subunit beta-A; AltName: Full=Adaptor protein complex AP subunit beta-A; AltN 2.0e-12
• FL-Next: sp=Beta-adaptin-like protein A; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene165062 SustainPine v3.0 340
• AutoFact: AP-3 complex subunit sigma-1, putative n=1 Tax=Ricinus communis RepID=B9S6H3_RICCO 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative Clathrin Coat Assembly protein 2.539e-08
Internal
sp_v3.0_unigene165555 SustainPine v3.0 321
• AutoFact: Got1/Sft2-like vescicle transport-like protein [Arabidopsis thaliana] ref|NP_195763.1| Got1/Sft2-like vescicle transport protein [Arabidopsis thaliana] ref|NP_001190200.1| Got1/Sft2-like vescicle transport protein [Arabidopsis thaliana] emb|CAB62447.1| pu 9.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene165621 SustainPine v3.0 353
• AutoFact: ADP-ribosylation factor 1 n=1 Tax=Camponotus floridanus RepID=E2AW29_9HYME 3.99931e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP-ribosylation factor 2.125e-18
C-terminus
sp_v3.0_unigene165695 SustainPine v3.0 307
• AutoFact: clathrin coat assembly protein ap17 [Coprinopsis cinerea okayama7#130] gb|EAU80909.1| clathrin coat assembly protein ap17 [Coprinopsis cinerea okayama7#130] 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative clathrin assembly protein 5.221e-11
C-terminus
sp_v3.0_unigene166057 SustainPine v3.0 303
• AutoFact: ARF/SAR family small GTPase n=1 Tax=Naegleria gruberi RepID=D2VJC3_NAEGR 4.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP-ribosylation factor 1 2.716e-14
C-terminus
sp_v3.0_unigene166160 SustainPine v3.0 412
• AutoFact: ADP-ribosylation factor n=1 Tax=Paxillus involutus RepID=Q4G2I7_PAXIN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP-ribosylation factor 1.153e-26
N-terminus
sp_v3.0_unigene166312 SustainPine v3.0 333
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 5.983e-39
Internal
sp_v3.0_unigene166323 SustainPine v3.0 343
• AutoFact: SNARE protein YKT6 n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0DZX2_LACBS 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: VAMP-like protein YKT62 5.558e-08
C-terminus
sp_v3.0_unigene166361 SustainPine v3.0 328
• AutoFact: ADP-ribosylation factor n=1 Tax=Grosmannia clavigera kw1407 RepID=F0XIE8_GROCL 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP-ribosylation factor 6.77e-27
N-terminus
sp_v3.0_unigene166376 SustainPine v3.0 455
• AutoFact: AP-1 complex subunit theta-1 [Aspergillus terreus NIH2624] gb|EAU31374.1| AP-1 complex subunit theta-1 [Aspergillus terreus NIH2624] 9.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Clathrin coat assembly protein ap19, putative 1.24e-08
C-terminus
sp_v3.0_unigene166791 SustainPine v3.0 300
• AutoFact: ER lumen protein retaining receptor n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0DXX0_LACBS 6.0e-31
• FL-Next: sp=ER lumen protein retaining receptor; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ER lumen protein retaining receptor 0.0
N-terminus
sp_v3.0_unigene166824 SustainPine v3.0 477
• AutoFact: pfam00847, AP2, AP2 domain 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAP2-like protein 8.653e-16
Putative Complete
sp_v3.0_unigene167172 SustainPine v3.0 128
• AutoFact: Adaptin N terminal region, putative [Oryza sativa Japonica Group] gb|AAX95779.1| Adaptin N terminal region, putative [Oryza sativa Japonica Group] gb|ABA91741.1| Adaptin N terminal region family protein, expressed [Oryza sativa Japonica Group] 2.0e-13
• FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Coatomer subunit beta 8.582e-13
Internal
sp_v3.0_unigene168023 SustainPine v3.0 360
• AutoFact: Putative integrase (Fragment) n=7 Tax=Cucumis melo RepID=B0B0F4_CUCME 5.0e-25
• FL-Next: tr=Putative uncharacterized protein; Beta vulgaris (Sugar beet). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.604e-10
Internal
sp_v3.0_unigene183761 SustainPine v3.0 514
• AutoFact: AP-2 complex subunit mu-1 [Arabidopsis thaliana] ref|XP_002865173.1| clathrin adaptor complexes medium subunit family protein [Arabidopsis lyrata subsp. lyrata] gb|AAB88283.1| AP47/50p [Arabidopsis thaliana] dbj|BAB08907.1| AP47/50p [Arabidopsis thaliana] 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene183808 SustainPine v3.0 511
• AutoFact: Coatomer subunit beta-1 n=7 Tax=Poaceae RepID=COPB1_ORYSJ 3.00018e-42
• FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Coatomer subunit beta 6.528e-13
C-terminus
sp_v3.0_unigene184652 SustainPine v3.0 387
• AutoFact: RecName: Full=Alpha-soluble NSF attachment protein; Short=Alpha-SNAP; AltName: Full=N-ethylmaleimide-sensitive factor attachment protein alpha gb|AAF37280.1|AF225512_1 soluble NSF attachment protein [Solanum tuberosum] 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-soluble NSF attachment protein 8.846e-16
N-terminus
sp_v3.0_unigene184962 SustainPine v3.0 499
• AutoFact: B3 domain-containing transcription repressor VAL2 [Arabidopsis thaliana] sp|Q5CCK4.1|VAL2_ARATH RecName: Full=B3 domain-containing transcription repressor VAL2; AltName: Full=Protein HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE-LIKE 1; AltName: Full=Protein V 5.0e-38
• FL-Next: tr=VP1/ABI3-like protein; Callitropsis nootkatensis. 0.0
• Sma3: Transcription factor, putative 9.846e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain