Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: vesicle-mediated transport

Term: GO:0016192  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene158111 SustainPine v3.0 351
AutoFact: ADP-ribosylation factor, arf [Tetrahymena thermophila] gb|EAR82037.1| ADP-ribosylation factor, arf [Tetrahymena thermophila SB210] 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ADP-ribosylation factor 3 8.406e-08
N-terminus
sp_v3.0_unigene158300 SustainPine v3.0 421
AutoFact: Vesicle-associated membrane protein, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NNF9_PHYIT 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Vesicle-associated membrane protein 712 1.945e-09
Putative N-terminus
sp_v3.0_unigene158463 SustainPine v3.0 429
AutoFact: Clathrin coat assembly protein ap19 n=5 Tax=Neoptera RepID=Q17MI6_AEDAE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Clathrin coat assembly protein ap19, putative 1.816e-08
N-terminus
sp_v3.0_unigene158616 SustainPine v3.0 363
AutoFact: ADP-ribosylation factor [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ADP-ribosylation factor 1.027e-26
Internal
sp_v3.0_unigene158790 SustainPine v3.0 281
AutoFact: CCR4-NOT transcription complex subunit 3 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C6J8_9EUKA 2.0e-29
FL-Next: sp=Probable NOT transcription complex subunit VIP2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Not1 N-terminal domain, CCR4-Not complex component family protein, expressed 2.304e-09
C-terminus
sp_v3.0_unigene158827 SustainPine v3.0 428
AutoFact: ADP-ribosylation factor 2 n=1 Tax=Haliotis discus discus RepID=B6RB72_HALDI 5.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ADP-ribosylation factor 8.132e-19
C-terminus
sp_v3.0_unigene159016 SustainPine v3.0 404
AutoFact: ADP-ribosylation factor n=1 Tax=Grosmannia clavigera kw1407 RepID=F0XIE8_GROCL 3.9937e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ADP-ribosylation factor 6.77e-27
N-terminus
sp_v3.0_unigene159037 SustainPine v3.0 413
AutoFact: coatomer complex subunit [Brachypodium sylvaticum] 7.0e-37
FL-Next: sp=Coatomer subunit beta'-1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Coatomer subunit beta'-2 2.737e-08
Internal
sp_v3.0_unigene159265 SustainPine v3.0 311
AutoFact: ADP-ribosylation factor [Oryza sativa Japonica Group] 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ADP-ribosylation factor 7.458e-27
N-terminus
sp_v3.0_unigene159294 SustainPine v3.0 320
AutoFact: ADP ribosylation factor 4 n=1 Tax=Marsupenaeus japonicus RepID=D3IWC8_PENJP 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ADP-ribosylation factor 2.707e-27
N-terminus
sp_v3.0_unigene159466 SustainPine v3.0 430
AutoFact: Beta-COP-like protein [Arabidopsis thaliana] emb|CAB79867.1| Beta-COP-like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 1.39e-12
Internal
sp_v3.0_unigene160144 SustainPine v3.0 336
AutoFact: Clathrin adapter complex medium subunit-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZBS8_PICSI 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative Clathrin Coat Assembly protein 3.142e-08
Putative C-terminus
sp_v3.0_unigene161323 SustainPine v3.0 435
AutoFact: AP-2 complex subunit sigma n=30 Tax=Eukaryota RepID=AP2S_ARATH 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Clathrin coat assembly protein ap19, putative 2.188e-08
C-terminus
sp_v3.0_unigene161996 SustainPine v3.0 237
AutoFact: DNA repair protein RAD50 [Arabidopsis thaliana] sp|Q9SL02.2|RAD50_ARATH RecName: Full=DNA repair protein RAD50; Short=AtRAD50 gb|AAF36810.1|AF168748_1 DNA repair-recombination protein [Arabidopsis thaliana] gb|AAD15407.2| putative RAD50 DNA repair protein 9.0e-29
FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Rad50 DNA repair/recombination protein 9.837e-09
C-terminus
sp_v3.0_unigene162252 SustainPine v3.0 296
AutoFact: polyprotein [Glycine max] 1.0e-19
FL-Next: tr=Disease resistance protein; pekinensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 4.516e-19
Internal
sp_v3.0_unigene162511 SustainPine v3.0 175
AutoFact: putative RAD50 DNA repair protein [Arabidopsis thaliana] 0.0001
FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene162837 SustainPine v3.0 351
AutoFact: Unassigned protein
FL-Next: sp=B3 domain-containing transcription factor VAL3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene163085 SustainPine v3.0 205
AutoFact: DNA recombination/repair protein n=1 Tax=Dictyostelium fasciculatum RepID=F4PXH9_9MYCE 2.0e-15
FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Rad50 DNA repair/recombination protein 8.081e-09
Internal
sp_v3.0_unigene163893 SustainPine v3.0 383
AutoFact: ADP-ribosylation factor 1 n=1 Tax=Trichinella spiralis RepID=E5SX59_TRISP 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ADP-ribosylation factor 7.017e-30
N-terminus
sp_v3.0_unigene164641 SustainPine v3.0 207
AutoFact: OSIGBa0111L12.7 protein n=1 Tax=Oryza sativa RepID=Q01IZ5_ORYSA 5.0e-16
FL-Next: tr=OSIGBa0111L12.7 protein; Oryza sativa (Rice). 0.0
Sma3: Polyprotein 8.129e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain