Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: vesicle-mediated transport

Term: GO:0016192  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene143612 SustainPine v3.0 455
• AutoFact: Nonclathrin coat protein zeta2-COP n=1 Tax=Solanum lycopersicum RepID=Q9MAZ6_SOLLC 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nonclathrin coat protein zeta1-COP 3.93e-18
Putative Complete
sp_v3.0_unigene143979 SustainPine v3.0 603
• AutoFact: AP-2 complex subunit sigma [Arabidopsis thaliana] ref|XP_002894072.1| hypothetical protein ARALYDRAFT_891585 [Arabidopsis lyrata subsp. lyrata] sp|Q84WL9.1|AP2S_ARATH RecName: Full=AP-2 complex subunit sigma; AltName: Full=Adapter-related protein complex 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene145011 SustainPine v3.0 472
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene145221 SustainPine v3.0 416
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 1.0e-34
• FL-Next: tr=Gypsy/Ty-3 retroelement polyprotein; 69905-74404; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene146139 SustainPine v3.0 888
• AutoFact: ADP-ribosylation factor [Hyacinthus orientalis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP-ribosylation factor 1.015e-26
Putative Complete
sp_v3.0_unigene146348 SustainPine v3.0 333
• AutoFact: ADP-ribosylation factor A1E [Arabidopsis thaliana] ref|NP_001190161.1| ADP-ribosylation factor A1E [Arabidopsis thaliana] ref|NP_001190162.1| ADP-ribosylation factor A1E [Arabidopsis thaliana] ref|XP_002880284.1| ADP-ribosylation factor A1E [Arabidopsis l 6.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP-ribosylation factor, arf, putative 2.091e-14
C-terminus
sp_v3.0_unigene147867 SustainPine v3.0 324
• AutoFact: GTP-binding protein SAR1A n=5 Tax=Embryophyta RepID=B4FPT6_MAIZE 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sar1-family small GTPase 8.455e-08
Putative C-terminus
sp_v3.0_unigene148064 SustainPine v3.0 370
• AutoFact: clathrin heavy chain [Glycine max] 4.0e-28
• FL-Next: sp=Clathrin heavy chain 2; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Clathrin heavy chain, putative 2.807e-08
Internal
sp_v3.0_unigene148067 SustainPine v3.0 262
• AutoFact: Unassigned protein
• FL-Next: sp=B3 domain-containing protein Os07g0679700; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene148152 SustainPine v3.0 275
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 6.602e-19
Internal
sp_v3.0_unigene148649 SustainPine v3.0 344
• AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Pinus brutia RepID=Q9M6N4_9CONI 4.00001e-40
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 2.24208e-44
Internal
sp_v3.0_unigene148825 SustainPine v3.0 122
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene149065 SustainPine v3.0 246
• AutoFact: Coatomer subunit beta, putative n=1 Tax=Ricinus communis RepID=B9RNM4_RICCO 3.0e-32
• FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Coatomer subunit beta 1.134e-12
N-terminus
sp_v3.0_unigene150213 SustainPine v3.0 331
• AutoFact: PREDICTED: similar to ADP-ribosylation factor n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000586367 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP-ribosylation factor 3.369e-19
Putative C-terminus
sp_v3.0_unigene150983 SustainPine v3.0 483
• AutoFact: Clathrin heavy chain, putative n=9 Tax=Arthropoda RepID=E0VD43_PEDHC 1.0e-24
• FL-Next: sp=Clathrin heavy chain 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene151101 SustainPine v3.0 383
• AutoFact: ARL3, ARF-like Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus RepID=D8LJW0_ECTSI 9.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene151137 SustainPine v3.0 401
• AutoFact: clathrin coat assembly protein ap-1 [Aedes aegypti] gb|EAT41228.1| clathrin coat assembly protein ap-1 [Aedes aegypti] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Clathrin coat assembly protein ap-1, putative 3.741e-09
Internal
sp_v3.0_unigene151181 SustainPine v3.0 385
• AutoFact: Clathrin assembly complex putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WA41_9STRA 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Clathrin coat assembly protein ap19, putative 1.895e-08
C-terminus
sp_v3.0_unigene151186 SustainPine v3.0 340
• AutoFact: Synaptobrevin/VAMP-like protein n=2 Tax=Solanum RepID=F5C0F9_SOLCH 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 25.3 kDa vesicle transport protein 2.9e-09
Putative C-terminus
sp_v3.0_unigene151311 SustainPine v3.0 469
• AutoFact: ADP-ribosylation factor n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SIE5_VERA1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP-ribosylation factor 5.351e-24
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain