Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: vesicle-mediated transport

Term: GO:0016192  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene131694 SustainPine v3.0 714
AutoFact: Coatomer subunit beta-1 n=7 Tax=Poaceae RepID=COPB1_ORYSJ 0.0
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 6.528e-13
C-terminus
sp_v3.0_unigene133353 SustainPine v3.0 305
AutoFact: adaptor protein/ adaptin-like [Arabidopsis thaliana] 5.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene133625 SustainPine v3.0 578
AutoFact: N-ethylmaleimide sensitive fusion protein [Nicotiana tabacum] 5.0e-29
FL-Next: sp=Vesicle-fusing ATPase; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene134379 SustainPine v3.0 280
AutoFact: Coatomer subunit beta-1 n=7 Tax=Poaceae RepID=COPB1_ORYSJ 2.0e-32
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 6.528e-13
Internal
sp_v3.0_unigene135515 SustainPine v3.0 435
AutoFact: ethylene-responsive transcription factor ERF017 [Arabidopsis thaliana] sp|Q84QC2.1|ERF17_ARATH RecName: Full=Ethylene-responsive transcription factor ERF017 gb|AAP06820.1| putative AP2 domain transcription factor [Arabidopsis thaliana] gb|AEE29818.1| ethy 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RAP2-like protein 1.341e-27
N-terminus
sp_v3.0_unigene135776 SustainPine v3.0 165
AutoFact: putative coatmer beta subunit (beta-coat protein) (beta-COP) [Oryza sativa Japonica Group] 9.0e-16
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 5.105e-13
Putative C-terminus
sp_v3.0_unigene137105 SustainPine v3.0 256
Sma3: Syntaxin 81 1.475e-09
putative_coding
sp_v3.0_unigene137267 SustainPine v3.0 415
AutoFact: coatomer alpha subunit-like protein [Lotus japonicus] 7.0e-10
FL-Next: sp=Coatomer subunit alpha-3; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene137508 SustainPine v3.0 493
AutoFact: nonclathrin coat protein zeta2-COP [Solanum lycopersicum] 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit zeta-1 1.311e-14
C-terminus
sp_v3.0_unigene137565 SustainPine v3.0 475
AutoFact: vesicle-associated membrane protein 727 [Arabidopsis thaliana] ref|NP_001078283.1| vesicle-associated membrane protein 727 [Arabidopsis thaliana] sp|Q9M376.1|VA727_ARATH RecName: Full=Vesicle-associated membrane protein 727; Short=AtVAMP727 emb|CAB71004.1 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Vesicle-associated membrane protein, putative 5.329e-13
C-terminus
sp_v3.0_unigene138122 SustainPine v3.0 375
AutoFact: Clathrin adapter complex medium subunit-like protein (Fragment) n=2 Tax=Picea sitchensis RepID=E0ZB24_PICSI 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Delta-COP 6.271e-09
C-terminus
sp_v3.0_unigene140633 SustainPine v3.0 715
AutoFact: [U] COG5143 Synaptobrevin/VAMP-like protein 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Vesicle-associated membrane protein, putative 1.623e-15
C-terminus
sp_v3.0_unigene140688 SustainPine v3.0 1051
AutoFact: vesicle-associated membrane protein 711 [Arabidopsis thaliana] sp|O49377.2|VA711_ARATH RecName: Full=Vesicle-associated membrane protein 711; Short=AtVAMP711; AltName: Full=v-SNARE synaptobrevin 7C; Short=AtVAMP7C gb|AAL27509.1|AF439840_1 AT4g32150/F10N7_ 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Vesicle-associated membrane protein 714 5.097e-09
Putative Complete
sp_v3.0_unigene140739 SustainPine v3.0 385
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA1_POPTR 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2 domain transcription factor-like 1.176e-17
N-terminus
sp_v3.0_unigene142637 SustainPine v3.0 470
AutoFact: ADP-ribosylation factor-like protein [Panax ginseng] 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ADP-ribosylation factor 3.875e-14
C-terminus
sp_v3.0_unigene142790 SustainPine v3.0 366
AutoFact: beta-adaptin-like protein C [Arabidopsis thaliana] sp|O81742.2|APBLC_ARATH RecName: Full=Beta-adaptin-like protein C; Short=At-bC-Ad; Short=At-betaC-Ad; AltName: Full=AP complex subunit beta-C; AltName: Full=Adaptor protein complex AP subunit beta-C; AltN 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene142876 SustainPine v3.0 395
AutoFact: Vesicle-fusing ATPase n=2 Tax=Arabidopsis RepID=NSF_ARATH 4.0e-13
FL-Next: sp=Vesicle-fusing ATPase; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene142948 SustainPine v3.0 341
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr2 scaffold_112, whole genome shotgun sequence 4.102e-06
N-terminus
sp_v3.0_unigene143351 SustainPine v3.0 333
AutoFact: Pyruvate kinase n=2 Tax=Picea sitchensis RepID=A9NUL1_PICSI 3.0e-34
FL-Next: sp=Pyruvate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pyruvate kinase 0.0
N-terminus
sp_v3.0_unigene143448 SustainPine v3.0 256
AutoFact: Synaptobrevin domain containing protein 7.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Vesicle-associated membrane protein, putative 5.906e-13
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain