Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ATP-dependent helicase activity

Term: GO:0008026  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene162645 SustainPine v3.0 332
AutoFact: DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana] dbj|BAB11511.1| ATP-dependent RNA helicase A-like protein [Arabidopsis thaliana] gb|AED90801.1| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana] 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: ATP-dependent RNA helicase, putative 8.574e-07
C-terminus
sp_v3.0_unigene162766 SustainPine v3.0 353
AutoFact: Putative caltractin n=1 Tax=Neospora caninum Liverpool RepID=F0VR46_NEOCA 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Centrin 1.449e-25
N-terminus
sp_v3.0_unigene162843 SustainPine v3.0 464
AutoFact: pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.716e-16
Internal
sp_v3.0_unigene163318 SustainPine v3.0 404
AutoFact: DEAD-box ATP-dependent RNA helicase 56 n=2 Tax=Arabidopsis thaliana RepID=F4JWF6_ARATH 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene163408 SustainPine v3.0 407
AutoFact: ATP-dependent RNA helicase (Fragment) n=1 Tax=Cucumis melo subsp. melo RepID=E5GBQ6_CUCME 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.112e-31
Internal
sp_v3.0_unigene163697 SustainPine v3.0 310
AutoFact: RVT_2 domain containing protein 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polyprotein, putative 1.765e-07
Internal
sp_v3.0_unigene163706 SustainPine v3.0 328
AutoFact: DNA-directed RNA polymerase (Fragment) n=10 Tax=Spermatophyta RepID=Q2TUN6_GINBI 6.0e-17
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 4.948e-18
Internal
sp_v3.0_unigene163867 SustainPine v3.0 268
AutoFact: Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor Domain Of Centrin 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Centrin 1.319e-34
N-terminus
sp_v3.0_unigene163984 SustainPine v3.0 185
AutoFact: RNA helicase - like protein [Arabidopsis thaliana] emb|CAB78848.1| RNA helicase-like protein [Arabidopsis thaliana] 7.0e-08
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Internal
sp_v3.0_unigene163988 SustainPine v3.0 345
AutoFact: Amino acid dehydrogenase family protein [Arabidopsis thaliana] gb|AAC13627.1| F6N23.26 gene product [Arabidopsis thaliana] emb|CAB80871.1| putative tetrahydrofolate synthase [Arabidopsis thaliana] gb|AAL24426.1| Unknown protein [Arabidopsis thaliana] gb|A 6.99949e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetrahydrofolate dehydrogenase/cyclohydrolase 6.452e-12
Internal
sp_v3.0_unigene164118 SustainPine v3.0 338
AutoFact: RecName: Full=Eukaryotic initiation factor 4A; Short=eIF-4A; AltName: Full=ATP-dependent RNA helicase eIF4A 7.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: eIF-4A-3 7.595e-08
N-terminus
sp_v3.0_unigene164507 SustainPine v3.0 137
AutoFact: putative transcription initiation factor IIF beta subunit [Oryza sativa Japonica Group] 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription initiation factor IIF subunit beta, putative 4.622e-09
Internal
sp_v3.0_unigene164698 SustainPine v3.0 324
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 32 dbj|BAC83715.1| putative RNA helicase [Oryza sativa Japonica Group] dbj|BAD31318.1| putative RNA helicase [Oryza sativa Japonica Group] 8.0e-06
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 32; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene164732 SustainPine v3.0 166
AutoFact: DEAD-box ATP-dependent RNA helicase 16 [Arabidopsis thaliana] sp|Q9SW44.1|RH16_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 16 emb|CAB45452.1| RNA helicase (RH16) [Arabidopsis thaliana] emb|CAB80208.1| RNA helicase (RH16) [Arabidopsis thaliana] 6.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 16 4.425e-09
Internal
sp_v3.0_unigene165378 SustainPine v3.0 146
AutoFact: putative ATP-dependent RNA helicase [Oryza sativa] 1.0e-06
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 17; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene165424 SustainPine v3.0 90
AutoFact: RNA helicase-related protein required for pre-mRNA splicing [Scheffersomyces stipitis CBS 6054] gb|EAZ63248.2| RNA helicase-related protein required for pre-mRNA splicing [Pichia stipitis CBS 6054] 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Chlorella variabilis (Green alga). 0.0
Internal
sp_v3.0_unigene166232 SustainPine v3.0 438
AutoFact: U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AED97425.1| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] 3.00018e-42
FL-Next: tr=Activating signal cointegrator 1 complex subunit; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene166387 SustainPine v3.0 451
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QZU8_ORYSJ 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polyprotein, putative 1.953e-06
N-terminus
sp_v3.0_unigene166452 SustainPine v3.0 413
AutoFact: 60S ribosomal protein L6 n=1 Tax=Postia placenta Mad-698-R RepID=B8P336_POSPM 0.0
FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L6 2.721e-38
N-terminus
sp_v3.0_unigene167050 SustainPine v3.0 142
AutoFact: putative DEAD box-like RNA helicase [Oryza sativa Japonica Group] dbj|BAD19277.1| putative DEAD box-like RNA helicase [Oryza sativa Japonica Group] 1.0e-05
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 1; Oryza sativa subsp. japonica (Rice). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain