Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA helicase, DEAD-box type, Q motif

Term: IPR014014  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene100930 SustainPine v3.0 358
• AutoFact: DEAD-box ATP-dependent RNA helicase 16 [Arabidopsis thaliana] sp|Q9SW44.1|RH16_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 16 emb|CAB45452.1| RNA helicase (RH16) [Arabidopsis thaliana] emb|CAB80208.1| RNA helicase (RH16) [Arabidopsis thaliana] 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 16 4.425e-09
Putative N-terminus
sp_v3.0_unigene101263 SustainPine v3.0 783
• AutoFact: DEAD-box ATP-dependent RNA helicase 38 [Arabidopsis thaliana] sp|Q93ZG7.2|RH38_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 38; AltName: Full=Low expression of osmotically-responsive genes 4 protein; AltName: Full=Protein CRYOPHYTE emb|CAB64214 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 38 9.932e-09
Putative N-terminus
sp_v3.0_unigene101670 SustainPine v3.0 757
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 45; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 45 1.083e-08
C-terminus
sp_v3.0_unigene103683 SustainPine v3.0 335
• AutoFact: DEAD-box ATP-dependent RNA helicase 37 n=2 Tax=Oryza sativa Japonica Group RepID=RH37_ORYSJ 8.00001e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 37 3.659e-08
Internal
sp_v3.0_unigene106507 SustainPine v3.0 372
• AutoFact: DEAD-box ATP-dependent RNA helicase 41 n=4 Tax=Oryza sativa RepID=RH41_ORYSJ 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 41 1.082e-09
Internal
sp_v3.0_unigene106738 SustainPine v3.0 301
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 22 7.0e-31
• FL-Next: Isoform 2 of DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica GN=Os09g0383400 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 22 2.166e-09
Internal
sp_v3.0_unigene111453 SustainPine v3.0 210
• AutoFact: Probable DEAD-box ATP-dependent RNA helicase 48 n=3 Tax=Arabidopsis RepID=RH48_ARATH 2.0e-09
• FL-Next: sp=Probable DEAD-box ATP-dependent RNA helicase 48; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene112364 SustainPine v3.0 284
• AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 24 3.506e-09
Putative C-terminus
sp_v3.0_unigene116395 SustainPine v3.0 299
• AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 24 3.506e-09
Internal
sp_v3.0_unigene118361 SustainPine v3.0 332
• AutoFact: RecName: Full=ATP-dependent RNA helicase DBP2 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 30 3.715e-08
Putative C-terminus
sp_v3.0_unigene120094 SustainPine v3.0 359
• AutoFact: DUF1777 multi-domain protein 2.0e-15
coding
sp_v3.0_unigene123985 SustainPine v3.0 226
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S033_RICCO 3.0e-22
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 50; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 50 3.449e-09
Internal
sp_v3.0_unigene125952 SustainPine v3.0 237
• AutoFact: DEAD-box ATP-dependent RNA helicase 22 n=3 Tax=Oryza sativa RepID=RH22_ORYSJ 1.0e-18
• FL-Next: Isoform 2 of DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica GN=Os09g0383400 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 22 1.736e-09
Internal
sp_v3.0_unigene127176 SustainPine v3.0 570
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 20 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 30 6.609e-08
Putative C-terminus
sp_v3.0_unigene127273 SustainPine v3.0 655
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 20 6.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.829e-08
C-terminus
sp_v3.0_unigene127278 SustainPine v3.0 90
• AutoFact: Atrophin-1 multi-domain protein 7.0e-08
unknown
sp_v3.0_unigene127914 SustainPine v3.0 639
• AutoFact: Silencing group B protein n=5 Tax=rosids RepID=B9HNT7_POPTR 3.00018e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Silencing group B protein 1.597e-11
C-terminus
sp_v3.0_unigene131219 SustainPine v3.0 322
• AutoFact: DEAD-box ATP-dependent RNA helicase 42 n=3 Tax=Arabidopsis RepID=RH42_ARATH 3.0e-28
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 45 9.358e-09
Internal
sp_v3.0_unigene131931 SustainPine v3.0 449
• AutoFact: ethylene-responsive RNA helicase [Solanum lycopersicum] 3.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 20 4.622e-09
Internal
sp_v3.0_unigene132849 SustainPine v3.0 499
• AutoFact: THO complex subunit 6 [Arabidopsis thaliana] sp|Q8L4M1.1|DWA1_ARATH RecName: Full=WD repeat-containing protein DWA1; AltName: Full=Protein DWD HYPERSENSITIVE TO ABA 1 gb|AAM20569.1| putative WD-40 repeat protein [Arabidopsis thaliana] gb|AAM91279.1| putat 8.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative WD-40 repeat protein 8.405e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain