Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: RNA helicase, DEAD-box type, Q motif

Term: IPR014014  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene79909 SustainPine v3.0 329
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 35A dbj|BAD38045.1| putative DEAD-box protein abstrakt [Oryza sativa Japonica Group] 1.0e-07
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 35A; Oryza sativa subsp. japonica (Rice). 0.0
C-terminus
sp_v3.0_unigene79936 SustainPine v3.0 241
AutoFact: similar to ATP-dependent RNA helicase [Arabidopsis thaliana] gb|AAM48010.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] 2.0e-14
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 47, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene80111 SustainPine v3.0 125
AutoFact: Pre-mRNA-processing ATP-dependent RNA helicase PRP5 n=2 Tax=Agaricales RepID=A8NXX3_COPC7 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene80531 SustainPine v3.0 114
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SE87_RICCO 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene80732 SustainPine v3.0 394
AutoFact: ATP-dependent RNA helicase FAL1 [Coprinopsis cinerea okayama7#130] gb|EAU84657.1| ATP-dependent RNA helicase FAL1 [Coprinopsis cinerea okayama7#130] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 9.996e-12
Internal
sp_v3.0_unigene80773 SustainPine v3.0 129
AutoFact: Unassigned protein
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 13; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene81131 SustainPine v3.0 181
AutoFact: RNA helicase [Arabidopsis thaliana] 8.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 4.21e-08
Internal
sp_v3.0_unigene81227 SustainPine v3.0 242
AutoFact: ATP-dependent RNA helicase dhh1 [Coprinopsis cinerea okayama7#130] gb|EAU89171.1| ATP-dependent RNA helicase dhh1 [Coprinopsis cinerea okayama7#130] 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 6 9.382e-08
Putative C-terminus
sp_v3.0_unigene83583 SustainPine v3.0 398
coding
sp_v3.0_unigene84077 SustainPine v3.0 284
AutoFact: DUF3729 multi-domain protein 1.0e-08
coding
sp_v3.0_unigene85442 SustainPine v3.0 272
AutoFact: PRP38_assoc multi-domain protein 5.0e-15
Sma3: ATP-dependent RNA helicase DDX23 7.054e-10
coding
sp_v3.0_unigene85882 SustainPine v3.0 350
AutoFact: TT_ORF1 multi-domain protein 3.0e-09
coding
sp_v3.0_unigene95613 SustainPine v3.0 656
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 45 8.17e-08
Putative N-terminus
sp_v3.0_unigene95918 SustainPine v3.0 316
AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 3.0e-13
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 24; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene96094 SustainPine v3.0 673
AutoFact: DEAD-box ATP-dependent RNA helicase 35 [Arabidopsis thaliana] sp|Q9LU46.1|RH35_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 35 dbj|BAA97391.1| DEAD-box protein abstrakt [Arabidopsis thaliana] dbj|BAE98527.1| DEAD-box protein abstrakt [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 7.159e-08
C-terminus
sp_v3.0_unigene97443 SustainPine v3.0 520
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 45 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 5.955e-12
Internal
sp_v3.0_unigene98337 SustainPine v3.0 720
AutoFact: dead-box helicase [Platanus x acerifolia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 5.628e-21
Internal
sp_v3.0_unigene98994 SustainPine v3.0 461
AutoFact: putative DEAD-box protein abstrakt [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 5.203e-08
Internal
sp_v3.0_unigene99035 SustainPine v3.0 1241
AutoFact: Helicase, C-terminal [Medicago truncatula] 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 1.867e-08
C-terminus
sp_v3.0_unigene99723 SustainPine v3.0 644
AutoFact: copper ion transmembrane transporter [Arabidopsis thaliana] gb|AAM67286.1| unknown [Arabidopsis thaliana] gb|AEC09465.1| copper ion transmembrane transporter [Arabidopsis thaliana] 9.99995e-41
FL-Next: sp=Probable DEAD-box ATP-dependent RNA helicase 48; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain