Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: RNA helicase, DEAD-box type, Q motif

Term: IPR014014  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene73496 SustainPine v3.0 229
• AutoFact: ATP-dependent RNA helicase eIF4A [Coprinopsis cinerea okayama7#130] gb|EAU80684.1| ATP-dependent RNA helicase eIF4A [Coprinopsis cinerea okayama7#130] 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.681e-09
C-terminus
sp_v3.0_unigene73635 SustainPine v3.0 522
• AutoFact: Eukaryotic initiation factor 4A n=16 Tax=Schizophora RepID=IF4A_DROME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 34 8.394e-08
Internal
sp_v3.0_unigene74470 SustainPine v3.0 206
• AutoFact: DEAD-box ATP-dependent RNA helicase 56 n=2 Tax=Arabidopsis thaliana RepID=F4JWF6_ARATH 8.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene74609 SustainPine v3.0 457
• AutoFact: ATP-dependent RNA helicase DBP8 n=3 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=DBP8_CRYNB 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene74760 SustainPine v3.0 326
• AutoFact: Helicase, C-terminal [Medicago truncatula] 1.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 30 2.032e-08
C-terminus
sp_v3.0_unigene75039 SustainPine v3.0 192
• AutoFact: DEAD-box ATP-dependent RNA helicase 38 n=3 Tax=Oryza sativa RepID=RH38_ORYSJ 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene75455 SustainPine v3.0 187
• AutoFact: ATP-dependent RNA helicase SUB2 [Coprinopsis cinerea okayama7#130] gb|EAU92983.1| ATP-dependent RNA helicase SUB2 [Coprinopsis cinerea okayama7#130] 5.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene76434 SustainPine v3.0 359
• AutoFact: ATP-dependent RNA helicase SUB2 [Coprinopsis cinerea okayama7#130] gb|EAU92983.1| ATP-dependent RNA helicase SUB2 [Coprinopsis cinerea okayama7#130] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene76764 SustainPine v3.0 279
• AutoFact: Pre-mRNA-processing ATP-dependent RNA helicase PRP5 n=1 Tax=Gibberella zeae PH-1 RepID=PRP5_GIBZE 3.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 2.754e-12
Internal
sp_v3.0_unigene76787 SustainPine v3.0 261
• AutoFact: ATP-dependent RNA helicase SUB2 [Coprinopsis cinerea okayama7#130] gb|EAU92983.1| ATP-dependent RNA helicase SUB2 [Coprinopsis cinerea okayama7#130] 8.99999e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 56 6.042e-09
Internal
sp_v3.0_unigene76831 SustainPine v3.0 301
• AutoFact: RNA helicase (Dbp), putative n=2 Tax=Trichocomaceae RepID=B6QP35_PENMQ 7.00649e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 30 2.563e-08
Internal
sp_v3.0_unigene77567 SustainPine v3.0 260
• AutoFact: Putative DEAD-box protein abstrakt n=1 Tax=Trifolium pratense RepID=Q2PEY4_TRIPR 9.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 3.996e-08
Internal
sp_v3.0_unigene77649 SustainPine v3.0 284
• AutoFact: ATP-dependent RNA helicase HAS1 [Coprinopsis cinerea okayama7#130] gb|EAU88940.1| ATP-dependent RNA helicase HAS1 [Coprinopsis cinerea okayama7#130] 7.0e-32
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 51; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 27 1.042e-08
Internal
sp_v3.0_unigene78576 SustainPine v3.0 279
• AutoFact: RecName: Full=ATP-dependent RNA helicase DBP2 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 30 2.004e-08
Internal
sp_v3.0_unigene78767 SustainPine v3.0 105
• AutoFact: DEAD-box ATP-dependent RNA helicase 56 n=2 Tax=Arabidopsis thaliana RepID=F4JWF6_ARATH 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene79002 SustainPine v3.0 259
• AutoFact: Proteasome subunit alpha type n=3 Tax=Picea sitchensis RepID=A9NK08_PICSI 4.0e-31
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 1.953e-25
Internal
sp_v3.0_unigene79376 SustainPine v3.0 156
• AutoFact: ATP-dependent RNA helicase eIF4A [Coprinopsis cinerea okayama7#130] gb|EAU80684.1| ATP-dependent RNA helicase eIF4A [Coprinopsis cinerea okayama7#130] 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene79539 SustainPine v3.0 251
• AutoFact: Apo-Eif4aiii n=2 Tax=Aureococcus anophagefferens RepID=F0Y6T8_9STRA 8.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 2 1.869e-08
C-terminus
sp_v3.0_unigene79570 SustainPine v3.0 307
• AutoFact: DEAD-box ATP-dependent RNA helicase 52 n=2 Tax=Arabidopsis RepID=RH52_ARATH 3.0e-07
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 52; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 37 1.855e-08
Internal
sp_v3.0_unigene79696 SustainPine v3.0 227
• AutoFact: DEAD-box ATP-dependent RNA helicase 39 [Arabidopsis thaliana] sp|Q56X76.2|RH39_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 39 gb|AAQ65197.1| At4g09730 [Arabidopsis thaliana] dbj|BAD43110.1| unnamed protein product [Arabidopsis thaliana] dbj|BA 5.0e-18
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 39; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain