Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA helicase, DEAD-box type, Q motif

Term: IPR014014  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene190639 SustainPine v3.0 365
AutoFact: Eukaryotic initiation factor 4A-III n=1 Tax=Caligus clemensi RepID=C1C237_9MAXI 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 9.226e-09
N-terminus
sp_v3.0_unigene190908 SustainPine v3.0 267
AutoFact: Putative DEAD-box protein abstrakt n=1 Tax=Trifolium pratense RepID=Q2PEY4_TRIPR 5.0e-06
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative N-terminus
sp_v3.0_unigene191246 SustainPine v3.0 483
AutoFact: Eukaryotic initiation factor 4A-III, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0N6A8_PHYIT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 3.282e-09
C-terminus
sp_v3.0_unigene191383 SustainPine v3.0 534
AutoFact: Probable eukaryotic initiation factor 4A n=5 Tax=Trypanosoma RepID=IF4A_TRYBB 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 2 4.041e-08
C-terminus
sp_v3.0_unigene191931 SustainPine v3.0 491
AutoFact: myc-regulated DEAD/H box 18 RNA helicase-like (ISS) [Ostreococcus tauri] emb|CAL55333.1| myc-regulated DEAD/H box 18 RNA helicase-like (ISS) [Ostreococcus tauri] 8.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene192582 SustainPine v3.0 493
AutoFact: PREDICTED: eukaryotic initiation factor 4A-III-like isoform 1 [Apis mellifera] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 2.805e-09
Internal
sp_v3.0_unigene199877 SustainPine v3.0 815
AutoFact: PREDICTED: alternative splicing factor SRp20/9G8, putative-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBBF9B 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene200329 SustainPine v3.0 495
AutoFact: Proteasome subunit alpha type n=2 Tax=Onchocercidae RepID=E1FL02_LOALO 0.0
FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit alpha type 4.05e-28
Internal
sp_v3.0_unigene204472 SustainPine v3.0 572
AutoFact: ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] emb|CAL55992.1| ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 27 1.176e-08
Putative N-terminus
sp_v3.0_unigene205666 SustainPine v3.0 431
AutoFact: GRP multi-domain protein 3.0e-14
Sma3: Putative glycine rich protein 1.101e-24
coding
sp_v3.0_unigene207787 SustainPine v3.0 549
AutoFact: Putative DEAD-box protein abstrakt n=1 Tax=Trifolium pratense RepID=Q2PEY4_TRIPR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 9.916e-12
Internal
sp_v3.0_unigene207829 SustainPine v3.0 474
AutoFact: peptide alpha-N-acetyltransferase [Arabidopsis thaliana] dbj|BAB10599.1| unnamed protein product [Arabidopsis thaliana] gb|AAK96745.1| Unknown protein [Arabidopsis thaliana] gb|AAL47392.1| unknown protein [Arabidopsis thaliana] gb|AAM64579.1| silencing gr 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Silencing group B protein 1.508e-11
N-terminus
sp_v3.0_unigene208721 SustainPine v3.0 237
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 13 dbj|BAA95778.1| ATP-dependent RNA helicase [Arabidopsis thaliana] 2.0e-17
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 13; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 13 8.543e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain