Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA helicase, DEAD-box type, Q motif

Term: IPR014014  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene132877 SustainPine v3.0 451
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 14 dbj|BAD68264.1| putative p68 RNA helicase [Oryza sativa Japonica Group] gb|EEE53957.1| hypothetical protein OsJ_00557 [Oryza sativa Japonica Group] gb|ACS44654.1| ATP-dependent RNA helicase DB10 [Oryza 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 3.057e-10
Internal
sp_v3.0_unigene135681 SustainPine v3.0 433
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAJ6_RICCO 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.633e-09
Putative C-terminus
sp_v3.0_unigene140586 SustainPine v3.0 578
• AutoFact: DEAD BOX RNA helicase RH15-like protein [Arabidopsis thaliana] 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 56 9.077e-09
N-terminus
sp_v3.0_unigene141905 SustainPine v3.0 182
• AutoFact: RNA helicase [Arabidopsis thaliana] 5.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene142008 SustainPine v3.0 359
• AutoFact: Probable fibrillarin (Fragment) n=2 Tax=Picea RepID=O65058_PICMA 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fibrillarin, putative 6.336e-08
Putative N-terminus
sp_v3.0_unigene142174 SustainPine v3.0 230
• AutoFact: Eukaryotic initiation factor 4A (ATP-dependent RNA helicase eIF4A) n=1 Tax=Chlorella variabilis RepID=E1ZM95_9CHLO 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic initiation factor 4A-like protein 5.506e-08
Putative N-terminus
sp_v3.0_unigene142323 SustainPine v3.0 551
• AutoFact: DEAD box RNA helicase [Pisum sativum] gb|AAR97917.1| DEAD box RNA helicase [Pisum sativum] 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 6.27e-08
C-terminus
sp_v3.0_unigene142848 SustainPine v3.0 310
• AutoFact: Helicase, C-terminal; Zinc finger, CCHC-type; GUCT [Medicago truncatula] 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 7 6.243e-11
Internal
sp_v3.0_unigene143072 SustainPine v3.0 201
• AutoFact: Eukaryotic initiation factor 4A-3 n=2 Tax=Arabidopsis RepID=IF4A3_ARATH 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 3.817e-09
Internal
sp_v3.0_unigene143430 SustainPine v3.0 759
• AutoFact: 26S proteasome regulatory subunit N8 [Arabidopsis thaliana] sp|O24412.1|PSD7_ARATH RecName: Full=Probable 26S proteasome non-ATPase regulatory subunit 7; AltName: Full=26S proteasome regulatory subunit rpn8; AltName: Full=Protein MOV34 gb|AAK55681.1|AF378 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene149220 SustainPine v3.0 292
• AutoFact: DEAD-box ATP-dependent RNA helicase 52 [Arabidopsis thaliana] sp|Q9M2F9.1|RH52_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 52 emb|CAB68195.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAK83627.1| AT3g58570/F14P22_160 [A 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 37 4.546e-08
Internal
sp_v3.0_unigene149558 SustainPine v3.0 192
• AutoFact: DEAD-box ATP-dependent RNA helicase 39 n=3 Tax=Oryza sativa RepID=RH39_ORYSJ 5.0e-13
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 39; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 39 2.399e-09
Internal
sp_v3.0_unigene149755 SustainPine v3.0 174
• AutoFact: ATP-dependent RNA helicase eIF4A n=2 Tax=Ustilaginaceae RepID=IF4A_USTMA 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 2 2.486e-08
Internal
sp_v3.0_unigene149800 SustainPine v3.0 362
• AutoFact: RNA helicase, DRH1 [Arabidopsis thaliana] 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 14 4.022e-08
Putative C-terminus
sp_v3.0_unigene150391 SustainPine v3.0 357
• AutoFact: PREDICTED: similar to Eukaryotic initiation factor 4A-II n=1 Tax=Hydra magnipapillata RepID=UPI0001925CB9 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.384e-09
C-terminus
sp_v3.0_unigene150397 SustainPine v3.0 198
• AutoFact: ATP-dependent RNA helicase DBP3 n=1 Tax=Phaeosphaeria nodorum SN15 RepID=DBP3_PHANO 3.0e-05
• FL-Next: tr=DEAD-domain-containing protein; Coccomyxa subellipsoidea C-169. 0.0
Internal
sp_v3.0_unigene150908 SustainPine v3.0 213
• AutoFact: ATP-dependent RNA helicase SUB2 n=3 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=SUB2_CRYNB 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene150944 SustainPine v3.0 438
• AutoFact: PREDICTED: similar to Eukaryotic initiation factor 4A-II n=1 Tax=Hydra magnipapillata RepID=UPI0001925CB9 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 4.553e-14
C-terminus
sp_v3.0_unigene151231 SustainPine v3.0 376
• AutoFact: eIF-4A-like DEAD family RNA helicase, putative n=6 Tax=Plasmodium RepID=A5KBQ1_PLAVS 9.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box family RNA helicase 4.873e-06
Putative C-terminus
sp_v3.0_unigene151917 SustainPine v3.0 485
• AutoFact: DEAD/DEAH box RNA helicase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MT79_PHYIT 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 5.252e-14
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain