Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: DNA/RNA helicase, DEAD/DEAH box type, N-terminal

Term: IPR011545  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene44337 SustainPine v3.0 607
• AutoFact: putative Helicase SKI2W [Oryza sativa Japonica Group] 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene44374 SustainPine v3.0 578
• AutoFact: DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana] sp|Q8H0U8.2|RH42_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 42 gb|AAD30599.1|AC007369_9 Similar to RNA helicases [Arabidopsis thaliana] gb|AEE30040.1| DEAD-box ATP-dependent RNA he 2.0e-26
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 45 4.49e-09
Internal
sp_v3.0_unigene44382 SustainPine v3.0 1524
• AutoFact: putative DNA helicase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA Helicase 4.028e-21
C-terminus
sp_v3.0_unigene44449 SustainPine v3.0 520
• AutoFact: putative helicase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CarD-like transcriptional regulator family protein, expressed 8.439e-09
Putative N-terminus
sp_v3.0_unigene44673 SustainPine v3.0 161
• AutoFact: DNA helicase RECQE-like [Oryza sativa Japonica Group] gb|EAZ24829.1| hypothetical protein OsJ_08609 [Oryza sativa Japonica Group] 6.0e-15
• FL-Next: Isoform 2 of ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana GN=RECQL3 0.0
Internal
sp_v3.0_unigene44854 SustainPine v3.0 345
• AutoFact: PREDICTED: similar to ATP-dependent helicase n=1 Tax=Vitis vinifera RepID=UPI00019836E3 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene45118 SustainPine v3.0 172
• AutoFact: putative ATP-dependent DNA helicase RecQ [Arabidopsis thaliana] 7.0e-18
• FL-Next: sp=ATP-dependent DNA helicase Q-like 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene45238 SustainPine v3.0 197
• AutoFact: Eukaryotic initiation factor 4A-like protein n=2 Tax=Chlamydomonadales RepID=A8IP17_CHLRE 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 7.358e-06
Internal
sp_v3.0_unigene45677 SustainPine v3.0 170
• AutoFact: putative helicase [Oryza sativa Japonica Group] 9.0e-24
• FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
• Sma3: ATP-dependent RNA helicase, putative 4.937e-09
Internal
sp_v3.0_unigene46075 SustainPine v3.0 1145
• AutoFact: Methylenetetrahydrofolate dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9T0V4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetrahydrofolate dehydrogenase/cyclohydrolase 8.213e-12
Complete
sp_v3.0_unigene46112 SustainPine v3.0 795
• AutoFact: DEAD-box ATP-dependent RNA helicase 35 [Arabidopsis thaliana] sp|Q9LU46.1|RH35_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 35 dbj|BAA97391.1| DEAD-box protein abstrakt [Arabidopsis thaliana] dbj|BAE98527.1| DEAD-box protein abstrakt [Arabidops 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.135e-19
C-terminus
sp_v3.0_unigene46300 SustainPine v3.0 402
• AutoFact: putative ATP-dependent DNA helicase RecQ [Arabidopsis thaliana] 0.0
• FL-Next: sp=ATP-dependent DNA helicase Q-like 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene47331 SustainPine v3.0 332
• AutoFact: dicer-like protein [Oryza sativa Indica Group] 1.0e-17
• FL-Next: sp=Endoribonuclease Dicer homolog 3a; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene47351 SustainPine v3.0 346
• AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 4.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 24 1.008e-07
Putative C-terminus
sp_v3.0_unigene47566 SustainPine v3.0 288
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SBK1_RICCO 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.44e-18
Putative N-terminus
sp_v3.0_unigene47812 SustainPine v3.0 1393
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 45 3.944e-08
C-terminus
sp_v3.0_unigene48048 SustainPine v3.0 491
• AutoFact: U520, putative n=2 Tax=rosids RepID=B9RY79_RICCO 0.0
• FL-Next: tr=U520, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene48678 SustainPine v3.0 200
• AutoFact: putative ATP-dependent DNA helicase RecQ [Arabidopsis thaliana] 1.0e-11
• FL-Next: sp=ATP-dependent DNA helicase Q-like 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene49149 SustainPine v3.0 192
• AutoFact: DNA polymerase theta, putative n=1 Tax=Ricinus communis RepID=B9RS63_RICCO 2.0e-17
• FL-Next: tr=DNA polymerase theta, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene49757 SustainPine v3.0 584
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 45 2.114e-07
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain