Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA/RNA helicase, DEAD/DEAH box type, N-terminal

Term: IPR011545  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene156539 SustainPine v3.0 524
AutoFact: Proteasome subunit alpha type n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CGK9_9EUKA 0.0
FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit alpha type 1.775e-25
Putative C-terminus
sp_v3.0_unigene156979 SustainPine v3.0 539
AutoFact: Proteasome subunit alpha type n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CGK9_9EUKA 1.4013e-45
FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit alpha type 1.775e-25
C-terminus
sp_v3.0_unigene157425 SustainPine v3.0 448
AutoFact: eukaryotic initiation factor 4A-III [Danio rerio] sp|Q7ZVA6.1|IF4A3_DANRE RecName: Full=Eukaryotic initiation factor 4A-III; Short=eIF-4A-III; Short=eIF4A-III; AltName: Full=ATP-dependent RNA helicase DDX48; AltName: Full=ATP-dependent RNA helicase eIF4A- 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 2.053e-09
C-terminus
sp_v3.0_unigene157633 SustainPine v3.0 253
AutoFact: putative eukaryotic translation initiation factor 4A [Maconellicoccus hirsutus] 4.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene157797 SustainPine v3.0 465
AutoFact: RNA helicase involved in maturation of 18S rRNA [Scheffersomyces stipitis CBS 6054] sp|A3GFV3.1|FAL1_PICST RecName: Full=ATP-dependent RNA helicase FAL1 gb|EAZ63408.1| RNA helicase involved in maturation of 18S rRNA [Pichia stipitis CBS 6054] 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 1.406e-09
C-terminus
sp_v3.0_unigene157822 SustainPine v3.0 277
AutoFact: PREDICTED: similar to nuclear RNA helicase Bat1 isoform 1 [Strongylocentrotus purpuratus] ref|XP_001178866.1| PREDICTED: similar to nuclear RNA helicase Bat1 [Strongylocentrotus purpuratus] ref|XP_001177126.1| PREDICTED: similar to nuclear RNA helicase Ba 6.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene158060 SustainPine v3.0 441
AutoFact: Proteasome subunit alpha type n=1 Tax=Branchiostoma floridae RepID=C3Z0Z0_BRAFL 0.0
FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit alpha type 0.0
N-terminus
sp_v3.0_unigene158186 SustainPine v3.0 550
AutoFact: RNA helicase [Oryza sativa Japonica Group] 7.00005e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 4.213e-14
C-terminus
sp_v3.0_unigene158491 SustainPine v3.0 528
AutoFact: 60S ribosomal protein L6 (Fragment) n=1 Tax=Chara globularis RepID=Q5KU23_CHAGO 1.0e-29
FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L6 0.0
Putative C-terminus
sp_v3.0_unigene158538 SustainPine v3.0 492
AutoFact: PremRNAsplicing factor 38B putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WLM7_9STRA 2.0e-14
FL-Next: tr=PremRNAsplicing factor 38B putative; Albugo laibachii Nc14. 0.0
Internal
sp_v3.0_unigene158610 SustainPine v3.0 309
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Culex quinquefasciatus RepID=B0WR64_CULQU 8.0e-22
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene158677 SustainPine v3.0 397
AutoFact: PREDICTED: eukaryotic translation initiation factor 4A-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBC11C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 1.182e-11
C-terminus
sp_v3.0_unigene158687 SustainPine v3.0 279
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 56 dbj|BAD88053.1| putative HLA-B associated transcript 1 [Oryza sativa Japonica Group] dbj|BAG90417.1| unnamed protein product [Oryza sativa Japonica Group] gb|ACV83946.1| DExD box helicase protein HLA-B 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene158794 SustainPine v3.0 241
AutoFact: DEAD-box ATP-dependent RNA helicase 16 n=2 Tax=Arabidopsis RepID=RH16_ARATH 8.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene158989 SustainPine v3.0 393
AutoFact: Eukaryotic initiation factor 4A n=3 Tax=Ditrysia RepID=B0FYV2_PLUXY 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic initiation factor 4A-like protein 9.322e-08
Internal
sp_v3.0_unigene158994 SustainPine v3.0 259
AutoFact: Proteasome subunit alpha type n=2 Tax=Salmo salar RepID=B5XDD4_SALSA 1.0e-26
FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit alpha type 3.662e-28
N-terminus
sp_v3.0_unigene159014 SustainPine v3.0 237
AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 7.0e-21
FL-Next: tr=At1g20960/F9H16_5; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene159030 SustainPine v3.0 524
AutoFact: RecName: Full=Eukaryotic initiation factor 4A-2; Short=eIF-4A-2; AltName: Full=ATP-dependent RNA helicase eIF4A-2 emb|CAA43513.1| nicotiana eukaryotic translation initiation factor 4A [Nicotiana plumbaginifolia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 3.389e-09
Internal
sp_v3.0_unigene159056 SustainPine v3.0 280
AutoFact: Proteasome subunit alpha type n=3 Tax=Agaricales RepID=B0D3V9_LACBS 2.0e-32
FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit alpha type 5.581e-38
N-terminus
sp_v3.0_unigene159065 SustainPine v3.0 205
AutoFact: Acetyltransferase (Fragment) n=6 Tax=Panarthropoda RepID=D0UKN6_9MYRI 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Silencing group B protein 1.538e-11
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain