Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA/RNA helicase, DEAD/DEAH box type, N-terminal

Term: IPR011545  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene148477 SustainPine v3.0 409
AutoFact: PREDICTED: similar to ATP-dependent helicase n=1 Tax=Vitis vinifera RepID=UPI00019836E3 3.0e-09
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
N-terminus
sp_v3.0_unigene148679 SustainPine v3.0 209
AutoFact: putative helicase [Oryza sativa Japonica Group] 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: ATP-dependent RNA helicase, putative 3.916e-06
Internal
sp_v3.0_unigene148818 SustainPine v3.0 174
AutoFact: mRNA splicing factor ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] emb|CAL52650.1| mRNA splicing factor ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene149055 SustainPine v3.0 289
AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 9.0e-24
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene149220 SustainPine v3.0 292
AutoFact: DEAD-box ATP-dependent RNA helicase 52 [Arabidopsis thaliana] sp|Q9M2F9.1|RH52_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 52 emb|CAB68195.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAK83627.1| AT3g58570/F14P22_160 [A 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 37 4.546e-08
Internal
sp_v3.0_unigene149497 SustainPine v3.0 126
AutoFact: U520, putative n=2 Tax=rosids RepID=B9RY79_RICCO 3.0e-17
FL-Next: tr=U520, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene149558 SustainPine v3.0 192
AutoFact: DEAD-box ATP-dependent RNA helicase 39 n=3 Tax=Oryza sativa RepID=RH39_ORYSJ 5.0e-13
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 39; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 39 2.399e-09
Internal
sp_v3.0_unigene149755 SustainPine v3.0 174
AutoFact: ATP-dependent RNA helicase eIF4A n=2 Tax=Ustilaginaceae RepID=IF4A_USTMA 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 2 2.486e-08
Internal
sp_v3.0_unigene149800 SustainPine v3.0 362
AutoFact: RNA helicase, DRH1 [Arabidopsis thaliana] 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 14 4.022e-08
Putative C-terminus
sp_v3.0_unigene150391 SustainPine v3.0 357
AutoFact: PREDICTED: similar to Eukaryotic initiation factor 4A-II n=1 Tax=Hydra magnipapillata RepID=UPI0001925CB9 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 1.384e-09
C-terminus
sp_v3.0_unigene150397 SustainPine v3.0 198
AutoFact: ATP-dependent RNA helicase DBP3 n=1 Tax=Phaeosphaeria nodorum SN15 RepID=DBP3_PHANO 3.0e-05
FL-Next: tr=DEAD-domain-containing protein; Coccomyxa subellipsoidea C-169. 0.0
Internal
sp_v3.0_unigene150543 SustainPine v3.0 298
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Cyanidium caldarium RepID=Q9M634_CYACA 3.0e-29
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
Internal
sp_v3.0_unigene150819 SustainPine v3.0 425
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Chlorella variabilis RepID=E1ZQQ5_9CHLO 6.0e-17
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene150908 SustainPine v3.0 213
AutoFact: ATP-dependent RNA helicase SUB2 n=3 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=SUB2_CRYNB 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene150944 SustainPine v3.0 438
AutoFact: PREDICTED: similar to Eukaryotic initiation factor 4A-II n=1 Tax=Hydra magnipapillata RepID=UPI0001925CB9 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 4.553e-14
C-terminus
sp_v3.0_unigene151066 SustainPine v3.0 470
AutoFact: Fructose-bisphosphate aldolase, cytoplasmic isozyme n=2 Tax=Caryophyllales RepID=ALF_SPIOL 2.0e-28
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene151114 SustainPine v3.0 384
AutoFact: GI13953 n=1 Tax=Drosophila mojavensis RepID=B4KKI2_DROMO 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene151231 SustainPine v3.0 376
AutoFact: eIF-4A-like DEAD family RNA helicase, putative n=6 Tax=Plasmodium RepID=A5KBQ1_PLAVS 9.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box family RNA helicase 4.873e-06
Putative C-terminus
sp_v3.0_unigene151831 SustainPine v3.0 356
AutoFact: ATP-dependent RNA helicase, TRAMP complex subunit Mtr4 [Schizosaccharomyces pombe 972h-] sp|O14232.1|YDVG_SCHPO RecName: Full=Uncharacterized helicase C6F12.16c emb|CAB11099.1| ATP-dependent RNA helicase, TRAMP complex subunit Mtr4 [Schizosaccharomyces po 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Helicase, putative 9.072e-12
N-terminus
sp_v3.0_unigene151917 SustainPine v3.0 485
AutoFact: DEAD/DEAH box RNA helicase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MT79_PHYIT 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 5.252e-14
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain