Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: DNA/RNA helicase, DEAD/DEAH box type, N-terminal

Term: IPR011545  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene49842 SustainPine v3.0 918
AutoFact: [R] COG1204 Superfamily II helicase 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene49894 SustainPine v3.0 393
AutoFact: putative DEAD box-like RNA helicase [Oryza sativa Japonica Group] dbj|BAD19277.1| putative DEAD box-like RNA helicase [Oryza sativa Japonica Group] 4.0e-26
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 1 4.849e-09
Putative N-terminus
sp_v3.0_unigene50443 SustainPine v3.0 188
AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 9.0e-27
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene50584 SustainPine v3.0 308
AutoFact: Ribonuclease III, putative n=1 Tax=Ricinus communis RepID=B9RQZ1_RICCO 8.0e-19
FL-Next: sp=Endoribonuclease Dicer homolog 3a; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene50829 SustainPine v3.0 214
AutoFact: PREDICTED: similar to ATP-dependent helicase n=1 Tax=Vitis vinifera RepID=UPI00019836E3 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Helicase, putative 4.12e-09
Internal
sp_v3.0_unigene50893 SustainPine v3.0 181
AutoFact: dicer-like protein [Oryza sativa Indica Group] 8.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dicer-like protein 4.387e-16
Internal
sp_v3.0_unigene50948 SustainPine v3.0 193
AutoFact: DNA polymerase theta subunit [Arabidopsis thaliana] dbj|BAD93700.1| helicase and polymerase containing protein TEBICHI [Arabidopsis thaliana] gb|AEE86105.1| DNA polymerase theta subunit [Arabidopsis thaliana] 9.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene51417 SustainPine v3.0 599
AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NP14_PICSI 2.0e-39
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene51681 SustainPine v3.0 501
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
N-terminus
sp_v3.0_unigene51944 SustainPine v3.0 212
AutoFact: Putative polyprotein n=2 Tax=Oryza sativa Japonica Group RepID=Q851Y3_ORYSJ 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.393e-08
Putative N-terminus
sp_v3.0_unigene52104 SustainPine v3.0 409
AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 2.0e-25
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
N-terminus
sp_v3.0_unigene52410 SustainPine v3.0 364
AutoFact: PREDICTED: similar to RECQSIM (Arabidopsis RecQ helicase sim); ATP-dependent helicase n=1 Tax=Vitis vinifera RepID=UPI00019849D7 4.0e-17
FL-Next: sp=ATP-dependent DNA helicase Q-like SIM; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative DNA helicase RecQsim 3.449e-09
Internal
sp_v3.0_unigene52673 SustainPine v3.0 208
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 35A dbj|BAD38045.1| putative DEAD-box protein abstrakt [Oryza sativa Japonica Group] 9.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 5.203e-08
Internal
sp_v3.0_unigene53365 SustainPine v3.0 431
AutoFact: DNA polymerase theta subunit [Arabidopsis thaliana] dbj|BAD93700.1| helicase and polymerase containing protein TEBICHI [Arabidopsis thaliana] gb|AEE86105.1| DNA polymerase theta subunit [Arabidopsis thaliana] 1.0e-10
FL-Next: tr=DNA polymerase I family protein expressed; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene53768 SustainPine v3.0 500
AutoFact: Dicer-like 1b protein [Physcomitrella patens] 1.0e-22
FL-Next: sp=Endoribonuclease Dicer homolog 3a; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene53781 SustainPine v3.0 455
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 20 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 30 2.918e-08
Putative C-terminus
sp_v3.0_unigene55058 SustainPine v3.0 349
AutoFact: U520, putative n=2 Tax=rosids RepID=B9RY79_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene55117 SustainPine v3.0 335
AutoFact: ATP-dependent RNA helicase DBP5 n=7 Tax=Arthrodermataceae RepID=C5FBW6_ARTOC 9.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: eIF-4A 4.471e-08
Putative C-terminus
sp_v3.0_unigene55124 SustainPine v3.0 479
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 7.612e-11
Internal
sp_v3.0_unigene55790 SustainPine v3.0 153
AutoFact: Meiotic crossover 1 n=2 Tax=Oryza sativa Japonica Group RepID=B6DMK2_ORYSJ 1.0e-09
FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain