Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Helicase, C-terminal

Term: IPR001650  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene37134 SustainPine v3.0 495
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 9.84e-08
Putative N-terminus
sp_v3.0_unigene37536 SustainPine v3.0 1605
• AutoFact: DNA helicase recq1, putative n=1 Tax=Ricinus communis RepID=B9S1J8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent DNA helicase, RecQ family protein, expressed 1.765e-11
C-terminus
sp_v3.0_unigene37623 SustainPine v3.0 1441
• AutoFact: pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative RNA helicase 2.626e-14
Complete
sp_v3.0_unigene37846 SustainPine v3.0 690
• AutoFact: eukaryotic initiation factor 4A [Pennisetum glaucum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 3.985e-09
Internal
sp_v3.0_unigene37860 SustainPine v3.0 809
• AutoFact: Chalcone synthase (Fragment) n=4 Tax=Pseudotsuga RepID=C6F7B7_PSEMZ 2.0e-18
• FL-Next: tr=Pinocembrin chalcone synthase; Pinus densiflora (Japanese red pine). 0.0
• Sma3: Glycine-rich RNA-binding protein 4.62428e-44
C-terminus
sp_v3.0_unigene37925 SustainPine v3.0 3299
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SYU7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 0.0
Putative Complete
sp_v3.0_unigene38813 SustainPine v3.0 1329
• AutoFact: SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gb|AEC10493.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SNF2P 8.254e-08
Complete
sp_v3.0_unigene39142 SustainPine v3.0 274
• AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9M1I1.1|FB304_ARATH RecName: Full=F-box protein At3g54460 emb|CAB77566.1| RING finger-like protein [Arabidopsis thaliana] gb|AAM13867.1| unknown protein [Arabidopsis thaliana] gb|AAO42330.1| unknown protein [Arabid 1.0e-30
• FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene39153 SustainPine v3.0 166
• AutoFact: putative DEAD box-like RNA helicase [Oryza sativa Japonica Group] dbj|BAD19277.1| putative DEAD box-like RNA helicase [Oryza sativa Japonica Group] 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 1 6.773e-09
N-terminus
sp_v3.0_unigene39156 SustainPine v3.0 531
• AutoFact: SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gb|AEC10493.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromatin remodeling complex subunit 2.515e-10
Internal
sp_v3.0_unigene39163 SustainPine v3.0 152
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene39326 SustainPine v3.0 355
• AutoFact: chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] dbj|BAF34944.1| chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] gb|EEE69802.1| hypothetical protein OsJ_29535 [Oryza sativa Japonica Group] 1.4013e-45
• FL-Next: sp=ATP-dependent DNA helicase DDM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chromatin remodeling complex subunit 8.136e-13
Internal
sp_v3.0_unigene39478 SustainPine v3.0 173
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAR2_RICCO 2.0e-07
• FL-Next: sp=Zinc finger CCCH domain-containing protein 4; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene39569 SustainPine v3.0 218
• AutoFact: ATP-dependent RNA and DNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RTM6_RICCO 3.0e-25
• FL-Next: tr=ATP-dependent RNA helicase SUPV3L1; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: ATP-dependent RNA and DNA helicase, putative 3.676e-12
Internal
sp_v3.0_unigene39643 SustainPine v3.0 678
• AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 7.087e-14
Putative N-terminus
sp_v3.0_unigene39687 SustainPine v3.0 162
• AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9GF82_POPTR 1.0e-05
• FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal
sp_v3.0_unigene39814 SustainPine v3.0 355
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S9D0_RICCO 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene39927 SustainPine v3.0 136
• AutoFact: SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gb|AEC10493.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] 5.0e-14
• FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: SNF2P 9.105e-08
Internal
sp_v3.0_unigene40115 SustainPine v3.0 150
• AutoFact: FAP multi-domain protein 1.0e-16
• Sma3: Glycine-rich protein 3.191e-13
unknown
sp_v3.0_unigene40218 SustainPine v3.0 203
• AutoFact: putative mitochondrial RNA helicase [Oryza sativa Japonica Group] 4.0e-25
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: RNA helicase like protein 2.695e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain