Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Alanyl-tRNA synthetase, class IIc, N-terminal

Term: IPR018164  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene81614 SustainPine v3.0 234
AutoFact: alanyl-tRNA synthetase [Saccharomyces cerevisiae YJM789] 8.0e-33
FL-Next: Isoform Cytoplasmic of Alanine--tRNA ligase OS=Arabidopsis thaliana GN=ALATS 0.0
Sma3: Alanyl-tRNA synthetase 9.882e-11
Internal
sp_v3.0_unigene104732 SustainPine v3.0 395
AutoFact: Putative cytosolic tRNA-Ala synthetase [Oryza sativa Japonica Group] 4.0e-13
FL-Next: sp=Alanine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene106650 SustainPine v3.0 343
AutoFact: leucyl-tRNA synthetase [Arabidopsis thaliana] gb|AAD36946.1|AF069441_6 putative leucyl tRNA synthetase [Arabidopsis thaliana] emb|CAB77903.1| putative leucyl tRNA synthetase [Arabidopsis thaliana] gb|AAL84999.1| AT4g04350/T19B17_7 [Arabidopsis thaliana] g 2.0e-34
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene108483 SustainPine v3.0 492
AutoFact: Probable alanyl-tRNA synthetase, chloroplastic n=1 Tax=Populus trichocarpa RepID=SYAP_POPTR 0.0
FL-Next: sp=Probable alanine--tRNA ligase, chloroplastic; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene112033 SustainPine v3.0 199
AutoFact: alanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q9FFC7.2|SYAP_ARATH RecName: Full=Probable alanyl-tRNA synthetase, chloroplastic; AltName: Full=Alanine--tRNA ligase; Short=AlaRS; AltName: Full=Protein EMBRYO DEFECTIVE 1030; AltName: Full=Protein EMBRYO D 3.0e-14
FL-Next: sp=Probable alanine--tRNA ligase, chloroplastic; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene126218 SustainPine v3.0 330
AutoFact: Putative cytosolic tRNA-Ala synthetase [Oryza sativa Japonica Group] 1.0e-20
FL-Next: sp=Alanine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Alanine-trna ligase 8.35e-09
Putative N-terminus
sp_v3.0_unigene131500 SustainPine v3.0 653
AutoFact: leucyl-tRNA synthetase [Arabidopsis thaliana] gb|AAD36946.1|AF069441_6 putative leucyl tRNA synthetase [Arabidopsis thaliana] emb|CAB77903.1| putative leucyl tRNA synthetase [Arabidopsis thaliana] gb|AAL84999.1| AT4g04350/T19B17_7 [Arabidopsis thaliana] g 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene140668 SustainPine v3.0 682
AutoFact: XRCC4 homolog [Populus nigra] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 5.783e-06
N-terminus
sp_v3.0_unigene142577 SustainPine v3.0 488
AutoFact: putative nucleotide binding protein [Arabidopsis thaliana] gb|AEE75838.1| putative nucleotide binding protein [Arabidopsis thaliana] 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene143686 SustainPine v3.0 393
AutoFact: putative nucleotide binding protein [Arabidopsis thaliana] gb|AEE75838.1| putative nucleotide binding protein [Arabidopsis thaliana] 5.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene148779 SustainPine v3.0 291
AutoFact: alanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q9FFC7.2|SYAP_ARATH RecName: Full=Probable alanyl-tRNA synthetase, chloroplastic; AltName: Full=Alanine--tRNA ligase; Short=AlaRS; AltName: Full=Protein EMBRYO DEFECTIVE 1030; AltName: Full=Protein EMBRYO D 2.0e-18
FL-Next: sp=Probable alanine--tRNA ligase, chloroplastic; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene156078 SustainPine v3.0 313
AutoFact: Alanyl-tRNA synthetase, putative n=1 Tax=Ricinus communis RepID=B9SYR5_RICCO 5.99756e-43
FL-Next: Isoform Cytoplasmic of Alanine--tRNA ligase OS=Arabidopsis thaliana GN=ALATS 0.0
Sma3: Alanine-trna ligase 1.103e-08
Internal
sp_v3.0_unigene195101 SustainPine v3.0 156
AutoFact: alanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q9FFC7.2|SYAP_ARATH RecName: Full=Probable alanyl-tRNA synthetase, chloroplastic; AltName: Full=Alanine--tRNA ligase; Short=AlaRS; AltName: Full=Protein EMBRYO DEFECTIVE 1030; AltName: Full=Protein EMBRYO D 2.0e-08
FL-Next: sp=Probable alanine--tRNA ligase, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene204073 SustainPine v3.0 366
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.991e-13
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain