Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Histone H2B

Term: IPR000558  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene36245 SustainPine v3.0 634
• AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
• FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Histone H2B 1.012e-35
C-terminus
sp_v3.0_unigene40653 SustainPine v3.0 414
• AutoFact: leucine-rich repeat extensin-like protein 4 [Arabidopsis thaliana] sp|Q9LHF1.1|LRX4_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 4; Short=AtLRX4; Short=LRR/EXTENSIN4; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Extensin-like protein 7.47e-29
Putative N-terminus
sp_v3.0_unigene42354 SustainPine v3.0 748
• AutoFact: Histone H2B.5 n=3 Tax=Magnoliophyta RepID=H2B5_WHEAT 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 1.463e-33
Complete
sp_v3.0_unigene43412 SustainPine v3.0 1017
• AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene46429 SustainPine v3.0 489
• AutoFact: Histone H2B (Fragment) n=1 Tax=Asparagus officinalis RepID=Q43724_ASPOF 5.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 1.364e-35
C-terminus
sp_v3.0_unigene46780 SustainPine v3.0 916
• AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative histone H4 0.0
Complete
sp_v3.0_unigene49501 SustainPine v3.0 197
• AutoFact: Extensin-like protein n=2 Tax=Arabidopsis RepID=O49448_ARATH 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Extensin-like protein 2.105e-23
Internal
sp_v3.0_unigene53546 SustainPine v3.0 365
• AutoFact: Histone H2B protein (Fragment) n=1 Tax=Pinus pinaster RepID=Q8VX93_PINPS 8.0e-09
• FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Histone H2B 1.695e-23
Putative N-terminus
sp_v3.0_unigene53729 SustainPine v3.0 389
• AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 1.089e-34
C-terminus
sp_v3.0_unigene56231 SustainPine v3.0 412
• AutoFact: Histone H2B n=2 Tax=Chlamydomonas reinhardtii RepID=A8IW75_CHLRE 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 3.581e-31
Putative Complete
sp_v3.0_unigene65434 SustainPine v3.0 170
• AutoFact: Histone H2B protein (Fragment) n=1 Tax=Pinus pinaster RepID=Q8VX93_PINPS 4.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 3.258e-32
Internal
sp_v3.0_unigene68501 SustainPine v3.0 285
• AutoFact: Histone H2B protein (Fragment) n=1 Tax=Pinus pinaster RepID=Q8VX93_PINPS 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 2.432e-38
Putative N-terminus
sp_v3.0_unigene68846 SustainPine v3.0 302
• AutoFact: Histone H2B (Fragment) n=1 Tax=Asparagus officinalis RepID=Q43724_ASPOF 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 3.877e-36
C-terminus
sp_v3.0_unigene68992 SustainPine v3.0 256
• AutoFact: Histone H2B.5 n=3 Tax=Magnoliophyta RepID=H2B5_WHEAT 6.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 6.727e-28
N-terminus
sp_v3.0_unigene69616 SustainPine v3.0 226
• AutoFact: Histone H2B.1 n=10 Tax=Magnoliophyta RepID=H2B1_ORYSJ 9.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 4.878e-28
Internal
sp_v3.0_unigene69617 SustainPine v3.0 178
• AutoFact: Histone H2B protein (Fragment) n=1 Tax=Pinus pinaster RepID=Q8VX93_PINPS 7.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 7.265e-16
Putative N-terminus
sp_v3.0_unigene71645 SustainPine v3.0 219
• AutoFact: Histone H2B n=2 Tax=Volvox carteri f. nagariensis RepID=D8TP19_VOLCA 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 6.466e-37
C-terminus
sp_v3.0_unigene72150 SustainPine v3.0 418
• AutoFact: Histone H2B protein (Fragment) n=1 Tax=Pinus pinaster RepID=Q8VX93_PINPS 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 2.45227e-43
Putative N-terminus
sp_v3.0_unigene72739 SustainPine v3.0 160
• AutoFact: Histone H2B n=1 Tax=Chlamydomonas sp. ICE-L RepID=E5G3R1_9CHLO 5.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 5.539e-30
C-terminus
sp_v3.0_unigene76198 SustainPine v3.0 369
• AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 3.282e-34
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain