Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Histone H2A

Term: IPR002119  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene98681 SustainPine v3.0 1950
AutoFact: glucan endo-1,3-beta-glucosidase 11 [Arabidopsis thaliana] sp|Q8L868.1|E1311_ARATH RecName: Full=Glucan endo-1,3-beta-glucosidase 11; AltName: Full=(1->3)-beta-glucan endohydrolase 11; Short=(1->3)-beta-glucanase 11; AltName: Full=Beta-1,3-endoglucanase 1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucan endo-1,3-beta-glucosidase, putative 3.862e-36
Complete
sp_v3.0_unigene99653 SustainPine v3.0 760
AutoFact: O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana] dbj|BAB01853.1| beta-1,3-glucanase [Arabidopsis thaliana] gb|ABE65959.1| glycosyl hydrolase family 17 protein [Arabidopsis thaliana] gb|AEE76811.1| O-Glycosyl hydrolases family 17 protein [Ara 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative beta-1,3-glucanase 8.71e-27
Internal
sp_v3.0_unigene101476 SustainPine v3.0 525
Sma3: Histone H2A 2.422e-29
unknown
sp_v3.0_unigene101905 SustainPine v3.0 466
AutoFact: Histone H2A n=1 Tax=Ectocarpus siliculosus RepID=D7FWI4_ECTSI 1.0e-24
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene106135 SustainPine v3.0 160
unknown
sp_v3.0_unigene117515 SustainPine v3.0 215
AutoFact: Histone H2A n=2 Tax=Selaginella moellendorffii RepID=D8RG98_SELML 2.0e-22
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative C-terminus
sp_v3.0_unigene126911 SustainPine v3.0 1206
AutoFact: Putative glucan-endo-1,3-beta-glucosidase (Fragment) n=1 Tax=Pinus pinaster RepID=A4FT65_PINPS 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative beta-1,3-glucanase 4.545e-33
C-terminus
sp_v3.0_unigene127466 SustainPine v3.0 992
AutoFact: NADH-dependent hydroxypyruvate reductase [Pachysandra terminalis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative C-terminus
sp_v3.0_unigene127563 SustainPine v3.0 1746
AutoFact: Glucan endo-1,3-beta-glucosidase, putative n=1 Tax=Ricinus communis RepID=B9RYW1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucan endo-1,3-beta-glucosidase, putative 2.943e-39
Complete
sp_v3.0_unigene127596 SustainPine v3.0 646
AutoFact: Histone H2AX n=7 Tax=Spermatophyta RepID=H2AX_PICAB 4.00001e-41
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene127737 SustainPine v3.0 1014
AutoFact: Histone H2AX n=7 Tax=Spermatophyta RepID=H2AX_PICAB 3.0e-20
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative Complete
sp_v3.0_unigene127833 SustainPine v3.0 963
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 5.0e-25
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene128023 SustainPine v3.0 400
AutoFact: Histone H2A n=1 Tax=Sorghum bicolor RepID=C5YYL4_SORBI 2.0e-25
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
N-terminus
sp_v3.0_unigene128204 SustainPine v3.0 495
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 1.0e-24
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene128313 SustainPine v3.0 882
AutoFact: RAD23 n=2 Tax=Pinaceae RepID=B5M6R6_PINSY 0.0
FL-Next: tr=RAD23; Pinus sylvestris var. mongolica. 0.0
Sma3: Uv excision repair protein rad23, putative 2.601e-11
C-terminus
sp_v3.0_unigene135659 SustainPine v3.0 266
AutoFact: Glucan endo-1,3-beta-glucosidase 14 n=4 Tax=Arabidopsis RepID=E1314_ARATH 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative beta-1,3-glucanase 1.009e-22
Internal
sp_v3.0_unigene140368 SustainPine v3.0 1062
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 6.0e-26
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene142362 SustainPine v3.0 569
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9P2K6_PICSI 3.0e-13
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
N-terminus
sp_v3.0_unigene143382 SustainPine v3.0 262
AutoFact: PREDICTED: similar to H2A histone family, member Z isoform 1 n=1 Tax=Canis lupus familiaris RepID=UPI00005A03C9 1.0e-12
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene143428 SustainPine v3.0 306
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9P2K6_PICSI 1.0e-14
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain