Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: intracellular

Term: GO:0005622  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene207692 SustainPine v3.0 1103
• AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 8.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene207755 SustainPine v3.0 600
• AutoFact: C2H2 type zinc finger family protein n=2 Tax=Picea RepID=Q3ZDL8_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene208106 SustainPine v3.0 166
• AutoFact: Unassigned protein 6.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene208396 SustainPine v3.0 350
• AutoFact: Dimer_Tnp_hAT domain containing protein 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: HAT family dimerisation domain containing protein 2.122e-07
Internal
sp_v3.0_unigene208474 SustainPine v3.0 902
• AutoFact: 40S ribosomal protein S8 n=4 Tax=Picea sitchensis RepID=A9NNT7_PICSI 0.0
• FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S8 0.0
Complete
sp_v3.0_unigene208540 SustainPine v3.0 852
• AutoFact: IQ-domain 6 protein [Arabidopsis thaliana] gb|AAC14531.1| putative SF16 protein {Helianthus annuus} [Arabidopsis thaliana] gb|ABM06004.1| At2g26180 [Arabidopsis thaliana] gb|AEC07805.1| IQ-domain 6 protein [Arabidopsis thaliana] 7.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Calmodulin binding protein 2.259e-26
Putative N-terminus
sp_v3.0_unigene208635 SustainPine v3.0 388
• AutoFact: dsRNA-binding protein LH [Brassica rapa subsp. chinensis] 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DsRNA-binding protein 1.376e-08
Complete
sp_v3.0_unigene208680 SustainPine v3.0 425
• AutoFact: Cl-channel clc-7 (Fragment) n=1 Tax=Populus trichocarpa RepID=B9HV75_POPTR 0.0
• FL-Next: sp=Chloride channel protein CLC-d; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cl-channel clc-7 6.171e-21
Internal
sp_v3.0_unigene208773 SustainPine v3.0 293
• AutoFact: GAT domain containing protein 5.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene208974 SustainPine v3.0 739
• AutoFact: Cyclic phosphodiesterase, putative n=1 Tax=Ricinus communis RepID=B9S8G6_RICCO 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene209172 SustainPine v3.0 475
• AutoFact: Chain A, Crystal Structure Of Cyclic Nucleotide Phosphodiesterase Of Appr>p From Arabidopsis Thaliana pdb|1FSI|B Chain B, Crystal Structure Of Cyclic Nucleotide Phosphodiesterase Of Appr>p From Arabidopsis Thaliana pdb|1FSI|C Chain C, Crystal Structure Of 4.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene209324 SustainPine v3.0 621
• AutoFact: pfam00241, Cofilin_ADF, Cofilin/tropomyosin-type actin-binding protein 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Actin-depolymerizing factor 1 9.007e-09
Putative Complete
sp_v3.0_unigene209330 SustainPine v3.0 677
• AutoFact: 40S ribosomal protein S8 (Fragment) n=1 Tax=Latrodectus hesperus RepID=E7D1D5_9ARAC 0.0
• FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S8 0.0
Complete
sp_v3.0_unigene209380 SustainPine v3.0 345
• AutoFact: 3'-5' exonuclease and KH-I domain-containing protein n=3 Tax=Arabidopsis RepID=F4ITJ6_ARATH 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene209629 SustainPine v3.0 789
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RBQ7_RICCO 0.0
• FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene209734 SustainPine v3.0 747
• AutoFact: Cyclic phosphodiesterase, putative n=1 Tax=Ricinus communis RepID=B9S8G6_RICCO 8.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene209800 SustainPine v3.0 277
• AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: HAT family dimerisation domain containing protein 4.5e-08
Internal
sp_v3.0_unigene209882 SustainPine v3.0 509
• AutoFact: Short chain alcohol dehydrogenase-like n=3 Tax=Arabidopsis RepID=Q8LFZ4_ARATH 7.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative tropinone reductase 0.0
N-terminus
sp_v3.0_unigene210310 SustainPine v3.0 666
• AutoFact: Cyclic phosphodiesterase, putative n=1 Tax=Ricinus communis RepID=B9S8G6_RICCO 5.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene210451 SustainPine v3.0 445
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain