Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Zinc finger, C2H2-like

Term: IPR015880  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene16500 SustainPine v3.0 1100
AutoFact: Dimer_Tnp_hAT domain containing protein 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr17 scaffold_85, whole genome shotgun sequence 4.023e-06
Putative Complete
sp_v3.0_unigene16552 SustainPine v3.0 890
AutoFact: C2H2 type zinc finger family protein n=2 Tax=Picea RepID=Q3ZDL8_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene16587 SustainPine v3.0 1748
AutoFact: eukaryotic tRNA isopentenyltransferase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Adenylate isopentenyltransferase 0.0
Complete
sp_v3.0_unigene16795 SustainPine v3.0 882
AutoFact: C2H2 type zinc finger family protein n=2 Tax=Picea RepID=Q3ZDL8_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17072 SustainPine v3.0 1012
AutoFact: zinc finger protein 706, gene 2 [Xenopus laevis] gb|AAH74174.1| MGC81992 protein [Xenopus laevis] 4.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17424 SustainPine v3.0 1907
AutoFact: ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] gb|AAF40452.1|AC004809_10 ESTs gb|N65605, gb|N38087, gb|T20485, gb|T13726, gb|N38339, gb|F15440 and gb|N97201 come from this gene [Arabidopsis thaliana] gb|AAL32687.1| Unknow 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Ubiquitin-associated uba/ubx domain-containing protein, putative 6.042e-09
Complete
sp_v3.0_unigene17702 SustainPine v3.0 1033
AutoFact: cysteine/histidine-rich C1 domain-containing protein [Arabidopsis thaliana] gb|AEC09452.1| cysteine/histidine-rich C1 domain-containing protein [Arabidopsis thaliana] 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene17790 SustainPine v3.0 1438
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: TRAF type zinc finger domain containing 1 1.54e-09
Complete
sp_v3.0_unigene17866 SustainPine v3.0 665
AutoFact: Cysteine/histidine-rich C1 domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=F4IRV7_ARATH 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene17939 SustainPine v3.0 1055
AutoFact: U4/U6.U5 tri-snRNP component [Arabidopsis thaliana] gb|AAK62582.1| AT3g05760/F10A16_5 [Arabidopsis thaliana] gb|AAK96449.1| AT3g05760/F10A16_5 [Arabidopsis thaliana] gb|AEE74293.1| U4/U6.U5 tri-snRNP component [Arabidopsis thaliana] 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Zinc finger protein, putative 0.0
N-terminus
sp_v3.0_unigene17945 SustainPine v3.0 825
AutoFact: C2H2 type zinc finger family protein n=2 Tax=Picea RepID=Q3ZDL8_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene18036 SustainPine v3.0 874
AutoFact: HD2 type histone deacetylase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RGA1_PHYPA 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene18287 SustainPine v3.0 837
AutoFact: HD2 type histone deacetylase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RGA1_PHYPA 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HD2 type histone deacetylase HDA106 5.361e-06
N-terminus
sp_v3.0_unigene18292 SustainPine v3.0 1096
AutoFact: 50S ribosomal protein L11 [Arabidopsis thaliana] sp|Q9MAP3.1|RK11_ARATH RecName: Full=50S ribosomal protein L11, chloroplastic; AltName: Full=CL11; Flags: Precursor gb|AAF31280.1|AC006424_9 Very similar to Spinacia oleracea 50S ribosomal p> [Arabidopsis t 5.0e-37
FL-Next: sp=50S ribosomal protein L11, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: 50S ribosomal protein L11, chloroplastic 2.887e-40
Complete
sp_v3.0_unigene18323 SustainPine v3.0 893
AutoFact: zinc finger, matrin type 5 [Danio rerio] 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene18337 SustainPine v3.0 1319
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
C-terminus
sp_v3.0_unigene18480 SustainPine v3.0 999
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene18752 SustainPine v3.0 832
AutoFact: Transcription factor (Fragment) n=1 Tax=Lycoris longituba RepID=D6MK34_9ASPA 8.0e-26
FL-Next: tr=Transcription factor AP2; Taxus cuspidata (Japanese yew). 0.0
Sma3: AP2/ERF domain-containing transcription factor 6.043e-34
C-terminus
sp_v3.0_unigene18785 SustainPine v3.0 880
AutoFact: fiber protein Fb2 [Gossypium barbadense] 5.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fiber protein Fb2 1.509e-07
N-terminus
sp_v3.0_unigene19079 SustainPine v3.0 460
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g30700; AltName: Full=Protein DYW9 emb|CAB52443.1| putative protein [Arabidopsis thaliana] emb|CAB79788 7.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.4013e-45
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain