Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C2H2-like

Term: IPR015880  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3439 SustainPine v3.0 1860
AutoFact: Aprataxin, putative n=1 Tax=Ricinus communis RepID=B9SWY0_RICCO 0.0
FL-Next: sp=Transcription factor bHLH140; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene3471 SustainPine v3.0 1136
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7S4_RICCO 5.0e-09
FL-Next: tr=Nucleic acid binding protein, putative; Ricinus communis (Castor bean). 0.0
Sma3: Nucleic acid binding protein, putative 4.484e-10
C-terminus
sp_v3.0_unigene3478 SustainPine v3.0 1337
AutoFact: zinc finger protein 6 [Arabidopsis thaliana] sp|Q39265.1|ZFP6_ARATH RecName: Full=Zinc finger protein 6 gb|AAF98212.1|AC007152_8 zinc finger protein zep6 [Arabidopsis thaliana] gb|AAA87302.1| zinc finger protein [Arabidopsis thaliana] gb|AAK91404.1| At1g6 4.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene3612 SustainPine v3.0 2717
AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ricinus communis RepID=B9SNV7_RICCO 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 23; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 6.924e-18
Putative Complete
sp_v3.0_unigene3668 SustainPine v3.0 860
AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HAT family dimerisation domain containing protein 1.788e-13
Putative C-terminus
sp_v3.0_unigene4100 SustainPine v3.0 1421
AutoFact: Abscisic acid receptor PYL4 n=2 Tax=Arabidopsis RepID=PYL4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bet v I allergen-like 8.553e-18
Complete
sp_v3.0_unigene4173 SustainPine v3.0 1740
AutoFact: Abscisic acid receptor PYR1 n=1 Tax=Fragaria x ananassa RepID=F2YHU9_FRAAN 0.0
FL-Next: sp=Abscisic acid receptor PYR1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: AT-rich element binding factor 3 4.786e-16
Complete
sp_v3.0_unigene4186 SustainPine v3.0 2681
AutoFact: Med15 domain containing protein 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene4204 SustainPine v3.0 2098
AutoFact: Embryonic flower 2 n=1 Tax=Yucca filamentosa RepID=Q1W6L0_YUCFI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Embryonic flower 2 1.009e-24
Complete
sp_v3.0_unigene4321 SustainPine v3.0 741
AutoFact: putative ubiquitin-specific protease [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 15; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cysteine-type endopeptidase, putative 1.473e-11
Internal
sp_v3.0_unigene4674 SustainPine v3.0 321
AutoFact: Putative beta-glucosidase [Oryza sativa Japonica Group] 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-glucosidase, putative 1.822e-34
Putative C-terminus
sp_v3.0_unigene4743 SustainPine v3.0 551
AutoFact: helicase associated domain-containing protein [Arabidopsis thaliana] gb|AEE33493.1| helicase associated domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 3.955e-16
Putative N-terminus
sp_v3.0_unigene4982 SustainPine v3.0 307
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S7A8_RICCO 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleic acid binding protein, putative 1.486e-20
Internal
sp_v3.0_unigene5019 SustainPine v3.0 1104
AutoFact: dual specificity protein phosphatase family protein [Arabidopsis thaliana] gb|AED93204.1| dual specificity protein phosphatase family protein [Arabidopsis thaliana] 0.0
FL-Next: Isoform 2 of Dual specificity protein phosphatase PHS1 OS=Arabidopsis thaliana GN=PHS1 0.0
Internal
sp_v3.0_unigene5556 SustainPine v3.0 1477
AutoFact: C2H2-like zinc finger protein [Arabidopsis thaliana] gb|AAL36315.1| unknown protein [Arabidopsis thaliana] gb|AAM61245.1| zinc finger-like protein [Arabidopsis thaliana] gb|AAM91787.1| unknown protein [Arabidopsis thaliana] gb|AED97727.1| C2H2-like zinc f 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleic acid binding protein, putative 8.884e-06
Complete
sp_v3.0_unigene5629 SustainPine v3.0 2217
AutoFact: splicing factor 3A subunit 3 [Arabidopsis thaliana] dbj|BAB09681.1| splicing factor 3a [Arabidopsis thaliana] gb|AAK64048.1| putative splicing factor 3a [Arabidopsis thaliana] gb|AAM44910.1| putative splicing factor 3a protein [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene5763 SustainPine v3.0 2100
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RJ95_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleic acid binding protein 5.098e-08
Complete
sp_v3.0_unigene5765 SustainPine v3.0 2347
AutoFact: Histone acetyltransferase n=5 Tax=rosids RepID=B9H794_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene5830 SustainPine v3.0 1336
AutoFact: Ubiquitin; TRAF-like [Medicago truncatula] 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene5917 SustainPine v3.0 2063
AutoFact: Histone acetyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RAZ9_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone acetyltransferase 6.133e-28
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain