Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Translation elongation factor EFTu/EF1A, domain 2

Term: IPR004161  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene52233 SustainPine v3.0 238
AutoFact: Translation factor GUF1 homolog, mitochondrial n=6 Tax=Poaceae RepID=GUF1_SORBI 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein-synthesizing GTPase 2.623e-12
Internal
sp_v3.0_unigene52463 SustainPine v3.0 432
AutoFact: Protein FAM96B, putative n=1 Tax=Ricinus communis RepID=B9SBL1_RICCO 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein FAM96B, putative 2.796e-09
C-terminus
sp_v3.0_unigene52657 SustainPine v3.0 182
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Putative C-terminus
sp_v3.0_unigene53757 SustainPine v3.0 428
AutoFact: Elongation factor-1 alpha (Fragment) n=5 Tax=Eukaryota RepID=A9QA20_CATRO 9.0e-29
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 2.626e-31
N-terminus
sp_v3.0_unigene53922 SustainPine v3.0 124
AutoFact: Elongation factor 1-alpha n=4 Tax=Chara RepID=F1T1F1_9VIRI 3.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha, putative 1.821e-07
Putative N-terminus
sp_v3.0_unigene53936 SustainPine v3.0 190
AutoFact: elongation factor 1-alpha [Cucumis sativus] 3.0e-18
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 1.104e-38
Internal
sp_v3.0_unigene53980 SustainPine v3.0 387
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Putative Complete
sp_v3.0_unigene54152 SustainPine v3.0 120
AutoFact: Elongation factor 4 n=6 Tax=Lactococcus lactis RepID=LEPA_LACLM 1.0e-13
FL-Next: sp=Translation factor GUF1 homolog, chloroplastic; Micromonas pusilla (strain CCMP1545) (Picoplanktonic green alga). 0.0
Sma3: Protein-synthesizing GTPase 4.631e-10
Internal
sp_v3.0_unigene54361 SustainPine v3.0 410
AutoFact: Protein FAM96B, putative n=1 Tax=Ricinus communis RepID=B9SBL1_RICCO 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein FAM96B, putative 2.796e-09
C-terminus
sp_v3.0_unigene54377 SustainPine v3.0 478
AutoFact: Translation elongation factor-1 alpha (Fragment) n=15 Tax=Dothideomycetes RepID=D3YFQ9_9PLEO 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 1.586e-39
Internal
sp_v3.0_unigene54453 SustainPine v3.0 342
AutoFact: translation elongation factor-1 alpha [Picea abies] 7.0e-24
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 1.891e-16
Putative C-terminus
sp_v3.0_unigene54711 SustainPine v3.0 135
AutoFact: GFP binding protein [Brachypodium sylvaticum] 4.0e-10
FL-Next: sp=Translation factor GUF1 homolog, mitochondrial; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene54953 SustainPine v3.0 318
AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 6.02558e-44
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 4.849e-39
Internal
sp_v3.0_unigene55792 SustainPine v3.0 293
AutoFact: Putative elongation factor 1-alpha (Fragment) n=1 Tax=Prunus dulcis RepID=A7Y7K1_PRUDU 8.0e-17
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
N-terminus
sp_v3.0_unigene56227 SustainPine v3.0 385
AutoFact: putative translation elongation factor 2EF1A / eIF-2-gamma [Arabidopsis thaliana] dbj|BAH19422.1| AT5G10630 [Arabidopsis thaliana] gb|AED91574.1| putative translation elongation factor 2EF1A / eIF-2-gamma [Arabidopsis thaliana] 2.0e-17
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative C-terminus
sp_v3.0_unigene56338 SustainPine v3.0 157
AutoFact: PREDICTED: U5 snRNP-specific protein, 116 kD n=1 Tax=Taeniopygia guttata RepID=UPI000194DBA9 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Aureococcus anophagefferens (Harmful bloom alga). 0.0
Sma3: Elongation factor tu gtp-binding domain protein 2 6.505e-09
Internal
sp_v3.0_unigene57132 SustainPine v3.0 472
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 4.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 3.315e-18
N-terminus
sp_v3.0_unigene59229 SustainPine v3.0 245
AutoFact: Elongation factor 1-alpha n=2 Tax=Enoplia RepID=E5S5Z6_TRISP 6.0e-11
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 3.929e-36
N-terminus
sp_v3.0_unigene59657 SustainPine v3.0 292
AutoFact: Elongation factor EF-2 n=2 Tax=Arabidopsis RepID=F4J2T9_ARATH 4.0e-25
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene59713 SustainPine v3.0 194
AutoFact: Elongation factor 4 n=71 Tax=Propionibacterium RepID=LEPA_PROAC 1.0e-27
FL-Next: sp=Translation factor GUF1 homolog, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein-synthesizing GTPase 1.087e-12
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain