Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleic acid binding

Term: GO:0003676  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene269 SustainPine v3.0 725
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SDJ7_RICCO 0.0
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 3.148e-11
Internal
sp_v3.0_unigene274 SustainPine v3.0 1377
AutoFact: MtN3_slv domain containing protein 4.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seven-transmembrane-domain protein 1 1.533e-17
Complete
sp_v3.0_unigene289 SustainPine v3.0 2014
AutoFact: ATP-dependent DNA helicase RecQ [Alkaliphilus oremlandii OhILAs] gb|ABW18526.1| ATP-dependent DNA helicase RecQ [Alkaliphilus oremlandii OhILAs] 1.99965e-42
FL-Next: sp=ATP-dependent DNA helicase Q-like 4B; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene314 SustainPine v3.0 2054
AutoFact: small RNA degrading nuclease 5 [Arabidopsis thaliana] sp|Q8L7M4.2|SDN5_ARATH RecName: Full=Small RNA degrading nuclease 5 gb|AED93489.1| small RNA degrading nuclease 5 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene319 SustainPine v3.0 2656
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAM10328.1| At2g44720/F16B22.21 [Arabidopsis thaliana] gb|AAN18203.1| At2g44720/F16B22.21 [Arabidopsis thaliana] gb|AEC10458.1| RNA recognition motif-containing protein [Arabidopsis thalia 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein At2g44720 5.669e-09
Complete
sp_v3.0_unigene362 SustainPine v3.0 870
AutoFact: PRP38_assoc multi-domain protein 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative C-terminus
sp_v3.0_unigene364 SustainPine v3.0 3464
AutoFact: PHD-finger, putative [Oryza sativa Japonica Group] gb|ABA92921.1| PHD-finger family protein, expressed [Oryza sativa Japonica Group] 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene400 SustainPine v3.0 1386
AutoFact: strictosidine synthase family protein [Arabidopsis thaliana] emb|CAC34495.1| putative strictosidine synthase-like [Arabidopsis thaliana] gb|AAT44971.1| At5g22020 [Arabidopsis thaliana] gb|ABF59040.1| At5g22020 [Arabidopsis thaliana] gb|AED92969.1| stricto 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative strictosidine synthase 1.171e-25
Complete
sp_v3.0_unigene403 SustainPine v3.0 1855
AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 4.649e-12
Putative Complete
sp_v3.0_unigene412 SustainPine v3.0 3447
AutoFact: Zinc finger, CCCH-type n=1 Tax=Medicago truncatula RepID=A2Q3L5_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zn-finger transcription factor 1.742e-14
Complete
sp_v3.0_unigene442 SustainPine v3.0 2272
AutoFact: Zinc finger CCCH domain-containing protein 64 n=3 Tax=Arabidopsis RepID=C3H64_ARATH 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein 64; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome chr11 scaffold_13, whole genome shotgun sequence 1.158e-06
Complete
sp_v3.0_unigene446 SustainPine v3.0 2737
AutoFact: R3h domain containing protein, putative n=1 Tax=Ricinus communis RepID=B9SG72_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene458 SustainPine v3.0 3188
AutoFact: RNA helicase n=1 Tax=Vigna radiata var. radiata RepID=Q9M6R6_VIGRR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 7 2.235e-11
Putative Complete
sp_v3.0_unigene496 SustainPine v3.0 3131
AutoFact: putative heterogeneous nuclear ribonucleoprotein [Vitis vinifera] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene522 SustainPine v3.0 2624
AutoFact: Unassigned protein
FL-Next: sp=Zinc finger CCCH domain-containing protein 18; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene533 SustainPine v3.0 1620
AutoFact: Desiccation-related protein PCC13-62 precursor, putative [Medicago truncatula] 0.0
FL-Next: sp=Desiccation-related protein PCC13-62; Craterostigma plantagineum (Blue gem) (Torenia plantagineum). 0.0
Sma3: Desiccation-related protein PCC13-62, putative 3.178e-14
Complete
sp_v3.0_unigene534 SustainPine v3.0 2324
AutoFact: zinc finger-related and helicase and IBR domain-containing protein [Arabidopsis thaliana] sp|P0CE10.1|Y4102_ARATH RecName: Full=Putative uncharacterized protein At4g01020, chloroplastic; Flags: Precursor gb|AEE81967.1| zinc finger-related and helicase and 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene578 SustainPine v3.0 1863
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RTX6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 58, chloroplastic 7.567e-09
Complete
sp_v3.0_unigene657 SustainPine v3.0 3163
AutoFact: probable ATP-dependent RNA helicase DDX11 [Danio rerio] gb|AAH85645.1| Zgc:92172 [Danio rerio] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene666 SustainPine v3.0 3181
AutoFact: ATP-dependent RNA and DNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SEF1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: RNA helicase like protein 1.529e-08
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain