Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleic acid binding

Term: GO:0003676  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene208721 SustainPine v3.0 237
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 13 dbj|BAA95778.1| ATP-dependent RNA helicase [Arabidopsis thaliana] 2.0e-17
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 13; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 13 8.543e-09
Internal
sp_v3.0_unigene209050 SustainPine v3.0 295
• AutoFact: pre-mRNA branch site protein p14 [Arabidopsis thaliana] ref|XP_002873554.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata] sp|Q9FMP4.1|PM14_ARATH RecName: Full=Pre-mRNA branch site p14-like protein dbj|BAB10037.1| unnamed prot 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pre-mRNA branch site p14-like protein 6.096e-09
N-terminus
sp_v3.0_unigene209143 SustainPine v3.0 572
• AutoFact: Aquaporin-like protein n=1 Tax=Picea abies RepID=O65860_PICAB 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aquaporin, MIP family, TIP subfamily 2.466e-39
Putative Complete
sp_v3.0_unigene209174 SustainPine v3.0 705
• AutoFact: putative glutathione S-transferase OsGSTF3 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione S-transferase 1.10703e-43
Putative Complete
sp_v3.0_unigene209294 SustainPine v3.0 523
• AutoFact: Peptidyl-prolyl cis-trans isomerase-like 3 n=2 Tax=Dictyostelium RepID=PPIL3_DICDI 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene209306 SustainPine v3.0 473
• AutoFact: Trypan_PARP multi-domain protein 4.0e-17
• Sma3: Putative glycine rich protein 5.722e-25
coding
sp_v3.0_unigene209308 SustainPine v3.0 535
• AutoFact: FAP multi-domain protein 7.0e-19
• Sma3: Glycine-rich protein 1.108e-14
coding
sp_v3.0_unigene209640 SustainPine v3.0 463
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent RNA helicase, putative 9.031e-10
Putative C-terminus
sp_v3.0_unigene209665 SustainPine v3.0 669
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene209690 SustainPine v3.0 658
• AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9S3P5_PHYPA 3.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene209706 SustainPine v3.0 511
• AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SBS3_PHYPA 2.8026e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene209716 SustainPine v3.0 489
• AutoFact: FAP multi-domain protein 6.0e-19
• Sma3: Glycine-rich protein 4.818e-12
coding
sp_v3.0_unigene209793 SustainPine v3.0 574
• AutoFact: PRP38_assoc multi-domain protein 3.0e-07
coding
sp_v3.0_unigene209831 SustainPine v3.0 318
• AutoFact: RNA recognition motif and CCHC-type zinc finger domain-containing protein [Arabidopsis thaliana] gb|AAL11606.1|AF424613_1 AT3g26420/F20C19_14 [Arabidopsis thaliana] dbj|BAB02203.1| unnamed protein product [Arabidopsis thaliana] gb|AAK96804.1| Unknown prot 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AT3g26420/F20C19_14 1.945e-09
N-terminus
sp_v3.0_unigene209861 SustainPine v3.0 782
• AutoFact: DAG protein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SE52_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DAG protein 2.739e-24
N-terminus
sp_v3.0_unigene209897 SustainPine v3.0 455
• AutoFact: DUF221 domain containing protein 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Early-responsive to dehydration protein, putative, expressed 2.495e-08
Internal
sp_v3.0_unigene210071 SustainPine v3.0 680
• AutoFact: Transcription factor (Fragment) n=1 Tax=Lycoris longituba RepID=D6MKG2_9ASPA 3.0e-39
• FL-Next: Isoform 2 of Cleavage and polyadenylation specificity factor CPSF30 OS=Arabidopsis thaliana GN=CPSF30 0.0
N-terminus
sp_v3.0_unigene210115 SustainPine v3.0 547
• AutoFact: UDP-glucose: anthocyanidin 5,3-O-glucosyltransferase [Rosa hybrid cultivar] 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Anthocyanidin 5,3-O-glucosyltransferase 6.284e-22
Putative C-terminus
sp_v3.0_unigene210218 SustainPine v3.0 503
• AutoFact: Aquaporin-like protein n=1 Tax=Picea abies RepID=O65860_PICAB 4.06377e-44
• FL-Next: tr=Aquaporin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Aquaporin, MIP family, TIP subfamily 2.811e-42
C-terminus
sp_v3.0_unigene210260 SustainPine v3.0 1053
• AutoFact: Pre-mRNA-splicing factor SLU7-A [Arabidopsis thaliana] sp|Q9SHY8.2|SLU7A_ARATH RecName: Full=Pre-mRNA-splicing factor SLU7-A gb|AAO22622.1| putative step II splicing factor [Arabidopsis thaliana] gb|AEE34408.1| Pre-mRNA-splicing factor SLU7-A [Arabidopsis 0.0
• FL-Next: sp=Pre-mRNA-splicing factor SLU7-A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain