Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Single-stranded nucleic acid binding R3H

Term: IPR001374  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene104242 SustainPine v3.0 454
AutoFact: Putative potassium transporter n=1 Tax=Vicia faba RepID=Q8VX37_VICFA 0.0
FL-Next: sp=Potassium transporter 23; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Potassium transporter, putative 1.16308e-43
Internal
sp_v3.0_unigene106404 SustainPine v3.0 417
AutoFact: Unassigned protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene108435 SustainPine v3.0 513
AutoFact: Keratin_B2 domain containing protein 3.0e-05
FL-Next: sp=NF-X1-type zinc finger protein NFXL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene108514 SustainPine v3.0 427
AutoFact: Putative ATP-dependent RNA helicase n=1 Tax=Oryza sativa RepID=Q9FW67_ORYSA 0.0
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 2.923e-18
Internal
sp_v3.0_unigene109615 SustainPine v3.0 592
AutoFact: high-affinity K+ transporter [Capsicum annuum] 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative potassium transporter 1.862e-32
N-terminus
sp_v3.0_unigene111987 SustainPine v3.0 420
AutoFact: SUZ domain containing protein 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene112812 SustainPine v3.0 426
AutoFact: putative ATP-dependent RNA helicase [Oryza sativa Japonica Group] 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: ATP-dependent RNA helicase, putative 9.306e-07
Internal
sp_v3.0_unigene120710 SustainPine v3.0 278
AutoFact: Unassigned protein 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene121407 SustainPine v3.0 331
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized protein ycf45; Odontella sinensis (Marine centric diatom) (Biddulphia sinensis). Plastid; Chloroplast. 0.0
Sma3: Uncharacterized protein ycf45 5.863e-12
Internal
sp_v3.0_unigene121746 SustainPine v3.0 427
AutoFact: Unassigned protein 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene128391 SustainPine v3.0 632
AutoFact: potassium transporter [Phragmites australis] 6.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium transporter, putative 4.365e-18
C-terminus
sp_v3.0_unigene137378 SustainPine v3.0 262
AutoFact: DEA(D/H)-box RNA helicase family protein n=4 Tax=Arabidopsis RepID=F4HYJ6_ARATH 5.0e-33
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 6.474e-14
Internal
sp_v3.0_unigene159577 SustainPine v3.0 479
AutoFact: helicase associated domain-containing protein [Arabidopsis thaliana] gb|AEE33493.1| helicase associated domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.361e-18
Internal
sp_v3.0_unigene160305 SustainPine v3.0 500
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene162583 SustainPine v3.0 335
AutoFact: putative stage III sporulation protein AA [Arabidopsis thaliana] gb|AAG51292.1|AC027035_15 unknown protein [Arabidopsis thaliana] gb|AAT46035.1| At1g33290 [Arabidopsis thaliana] gb|AAT70483.1| At1g33290 [Arabidopsis thaliana] gb|AEE31581.1| putative stage 1.0e-30
FL-Next: sp=Uncharacterized protein ycf45; Porphyra purpurea. Plastid; Chloroplast. 0.0
Internal
sp_v3.0_unigene165496 SustainPine v3.0 358
AutoFact: DNA helicase n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8P0D1_COPC7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein smubp-2, putative 6.349e-09
Internal
sp_v3.0_unigene183603 SustainPine v3.0 334
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 6.0e-33
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 8.642e-14
Internal
sp_v3.0_unigene193628 SustainPine v3.0 499
AutoFact: Zinc finger protein n=1 Tax=Ciona intestinalis RepID=Q1RLC0_CIOIN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein smubp-2, putative 7.567e-09
Putative C-terminus
sp_v3.0_unigene199229 SustainPine v3.0 549
AutoFact: putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica Group] 5.04467e-44
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 7.971e-19
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain