Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Single-stranded nucleic acid binding R3H

Term: IPR001374  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene56422 SustainPine v3.0 301
AutoFact: putative stage III sporulation protein AA [Arabidopsis thaliana] gb|AAG51292.1|AC027035_15 unknown protein [Arabidopsis thaliana] gb|AAT46035.1| At1g33290 [Arabidopsis thaliana] gb|AAT70483.1| At1g33290 [Arabidopsis thaliana] gb|AEE31581.1| putative stage 6.0e-36
FL-Next: sp=Uncharacterized protein ycf45; Porphyra purpurea. Plastid; Chloroplast. 0.0
Sma3: Stage III sporulation protein AA, putative 2.47e-08
Internal
sp_v3.0_unigene59574 SustainPine v3.0 275
AutoFact: DEA(D/H)-box RNA helicase family protein n=4 Tax=Arabidopsis RepID=F4HYJ6_ARATH 2.0e-40
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 2.605e-13
Internal
sp_v3.0_unigene62181 SustainPine v3.0 214
AutoFact: putative helicase [Oryza sativa Japonica Group] 7.0e-31
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative RNA helicase A 2.414e-11
Internal
sp_v3.0_unigene62387 SustainPine v3.0 286
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 3.0e-11
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene63777 SustainPine v3.0 298
AutoFact: putative ATP-dependent RNA helicase [Oryza sativa Japonica Group] 5.0e-17
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene65204 SustainPine v3.0 152
AutoFact: Unassigned protein 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene68937 SustainPine v3.0 240
AutoFact: putative potasium transporter [Oryza sativa Japonica Group] 5.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium transporter, putative 3.626e-23
Putative N-terminus
sp_v3.0_unigene69949 SustainPine v3.0 471
AutoFact: Potassium transporter 9 n=2 Tax=Arabidopsis thaliana RepID=POT9_ARATH 6.02558e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium transporter, putative 5.091e-40
N-terminus
sp_v3.0_unigene73970 SustainPine v3.0 294
AutoFact: PREDICTED: similar to helicase domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI0001985AA9 9.00054e-42
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 4.276e-18
Internal
sp_v3.0_unigene76842 SustainPine v3.0 326
AutoFact: putative potasium transporter [Oryza sativa Japonica Group] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium transporter, putative 2.959e-23
N-terminus
sp_v3.0_unigene77957 SustainPine v3.0 265
AutoFact: Potassium transporter 17 n=2 Tax=Andropogoneae RepID=B6T8T1_MAIZE 1.0e-32
FL-Next: sp=Potassium transporter 26; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Potassium transporter, putative 3.36312e-44
Internal
sp_v3.0_unigene80058 SustainPine v3.0 180
AutoFact: putative helicase [Oryza sativa Japonica Group] 2.0e-24
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative RNA helicase A 3.02e-11
Internal
sp_v3.0_unigene94145 SustainPine v3.0 448
AutoFact: Potassium transporter 9 n=2 Tax=Arabidopsis thaliana RepID=POT9_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium transporter, putative 3.416e-23
N-terminus
sp_v3.0_unigene94322 SustainPine v3.0 1489
AutoFact: potassium transporter 1 [Arabidopsis thaliana] sp|O22397.2|POT1_ARATH RecName: Full=Potassium transporter 1; Short=AtKT1; Short=AtKUP1; Short=AtPOT1 gb|AAB87687.1| potassium transporter [Arabidopsis thaliana] gb|AAB88901.1| high-affinity potassium transpo 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium transporter, putative 2.20004e-43
Putative Complete
sp_v3.0_unigene95031 SustainPine v3.0 343
AutoFact: putative high-affinity potassium transporter protein 1 [Nicotiana tabacum] 5.0e-40
FL-Next: sp=Putative potassium transporter 8; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Potassium transporter, putative 5.021e-18
Internal
sp_v3.0_unigene102098 SustainPine v3.0 615
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 3.728e-16
Putative N-terminus
sp_v3.0_unigene102741 SustainPine v3.0 566
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 6.99949e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene103527 SustainPine v3.0 601
AutoFact: pfam01422, zf-NF-X1, NF-X1 type zinc finger 2.0e-06
FL-Next: sp=NF-X1-type zinc finger protein NFXL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene104114 SustainPine v3.0 487
AutoFact: putative potasium transporter [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Probable potassium transporter 11; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Potassium transporter, putative 1.03696e-43
Internal
sp_v3.0_unigene104192 SustainPine v3.0 228
AutoFact: Unassigned protein 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain