Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Proteasome, subunit alpha/beta

Term: IPR001353  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene79002 SustainPine v3.0 259
AutoFact: Proteasome subunit alpha type n=3 Tax=Picea sitchensis RepID=A9NK08_PICSI 4.0e-31
FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit alpha type 1.953e-25
Internal
sp_v3.0_unigene79434 SustainPine v3.0 347
AutoFact: Proteasome subunit alpha type n=1 Tax=Tuber melanosporum Mel28 RepID=D5GL27_TUBMM 8.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit alpha type 1.055e-30
C-terminus
sp_v3.0_unigene79747 SustainPine v3.0 321
AutoFact: Proteasome subunit beta type n=1 Tax=Picea sitchensis RepID=A9NYV8_PICSI 2.0e-38
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit beta type 7,10, putative 1.385e-08
Misassembled
sp_v3.0_unigene83369 SustainPine v3.0 302
AutoFact: Drf_FH1 multi-domain protein 3.0e-13
Sma3: Proline-rich protein 3.074e-17
coding
sp_v3.0_unigene86832 SustainPine v3.0 410
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7U598_VITVI 6.0e-07
Sma3: Extensin 3.391e-22
coding
sp_v3.0_unigene119795 SustainPine v3.0 189
AutoFact: Proteasome subunit alpha type n=4 Tax=Pleosporineae RepID=Q0V2R7_PHANO 1.0e-26
FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene127400 SustainPine v3.0 783
AutoFact: Proteasome subunit beta type n=2 Tax=Picea sitchensis RepID=A9NKT0_PICSI 0.0
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
N-terminus
sp_v3.0_unigene127890 SustainPine v3.0 1249
AutoFact: Proteasome subunit beta type n=2 Tax=Picea sitchensis RepID=A9NYS4_PICSI 0.0
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene127937 SustainPine v3.0 986
AutoFact: Proteasome subunit beta type n=2 Tax=Picea sitchensis RepID=A9NLJ2_PICSI 0.0
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene128057 SustainPine v3.0 679
AutoFact: Proteasome subunit beta type n=1 Tax=Picea sitchensis RepID=A9NMG7_PICSI 0.0
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit beta type-1 6.241e-12
N-terminus
sp_v3.0_unigene129839 SustainPine v3.0 740
AutoFact: Lipid binding protein, putative n=1 Tax=Ricinus communis RepID=B9T135_RICCO 5.0e-21
FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
Sma3: 36.4 kDa proline-rich protein 3.248e-13
Misassembled
sp_v3.0_unigene129859 SustainPine v3.0 605
AutoFact: Proteasome subunit alpha type n=1 Tax=Picea sitchensis RepID=A9NP38_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit alpha type 7.55706e-41
Misassembled
sp_v3.0_unigene132429 SustainPine v3.0 473
AutoFact: Extensin_2 multi-domain protein 4.0e-23
Sma3: Extensin 0.0
coding
sp_v3.0_unigene133345 SustainPine v3.0 409
AutoFact: Proteasome subunit beta type n=1 Tax=Picea sitchensis RepID=A9NKA9_PICSI 9.99967e-42
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit beta type-4 2.194e-08
C-terminus
sp_v3.0_unigene136002 SustainPine v3.0 285
AutoFact: RecName: Full=Proteasome subunit beta type-5; AltName: Full=20S proteasome subunit E; AltName: Full=Proteasome epsilon chain; Flags: Precursor dbj|BAA21650.1| 26S proteasome beta subunit [Spinacia oleracea] 4.0e-37
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit beta type 5 1.895e-08
Internal
sp_v3.0_unigene139468 SustainPine v3.0 196
AutoFact: Proteasome subunit alpha type n=1 Tax=Picea sitchensis RepID=A9NP38_PICSI 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit alpha type 1.5e-33
Putative C-terminus
sp_v3.0_unigene140916 SustainPine v3.0 115
AutoFact: proteasome subunit alpha type-2-B [Arabidopsis thaliana] ref|NP_001077845.1| proteasome subunit alpha type-2-B [Arabidopsis thaliana] ref|NP_001077846.1| proteasome subunit alpha type-2-B [Arabidopsis thaliana] sp|Q8L4A7.1|PSA2B_ARATH RecName: Full=Protea 2.0e-08
FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit alpha type 1.952e-10
Internal
sp_v3.0_unigene142176 SustainPine v3.0 298
AutoFact: Proteasome subunit alpha type n=1 Tax=Picea sitchensis RepID=A9NK23_PICSI 2.0e-18
FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit alpha type 2.902e-08
Internal
sp_v3.0_unigene142634 SustainPine v3.0 516
AutoFact: Proteasome subunit alpha type n=3 Tax=Picea sitchensis RepID=A9NWU0_PICSI 2.0e-24
FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit alpha type 9.561e-07
C-terminus
sp_v3.0_unigene142920 SustainPine v3.0 282
AutoFact: Proteasome subunit alpha type n=3 Tax=Picea sitchensis RepID=A9NWU0_PICSI 6.0e-21
FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit alpha type 3.058e-23
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain