Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Small GTPase superfamily

Term: IPR001806  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene159103 SustainPine v3.0 151
AutoFact: Ran family small GTPase n=1 Tax=Naegleria gruberi RepID=D2V0X6_NAEGR 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 5.807e-08
N-terminus
sp_v3.0_unigene159118 SustainPine v3.0 326
AutoFact: PREDICTED: ras-related protein Rab-21-like [Monodelphis domestica] 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rab21-family small GTPase 1.034e-11
N-terminus
sp_v3.0_unigene159248 SustainPine v3.0 438
AutoFact: PREDICTED: similar to Ras-related protein Rab-11B (GTP-binding protein YPT3) n=1 Tax=Equus caballus RepID=UPI0001796599 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding protein 3.243e-17
N-terminus
sp_v3.0_unigene159259 SustainPine v3.0 373
AutoFact: Rab11 family GTPase putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WXW1_9STRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related protein Rab11C 7.784e-15
Putative C-terminus
sp_v3.0_unigene159277 SustainPine v3.0 167
AutoFact: PREDICTED: similar to Chain , Cdc42 From Human, Nmr, 20 Structures, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BC21 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rac protein 1.763e-17
Internal
sp_v3.0_unigene159393 SustainPine v3.0 299
AutoFact: PREDICTED: similar to Ras-related protein Rab-21 n=1 Tax=Ciona intestinalis RepID=UPI0000524B9D 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rab21-family small GTPase 1.626e-13
Internal
sp_v3.0_unigene159561 SustainPine v3.0 319
AutoFact: small GTP-binding protein [Mesembryanthemum crystallinum] 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene161103 SustainPine v3.0 355
AutoFact: Rab-family small GTPase Rab1A n=1 Tax=Tetrahymena thermophila RepID=E1CAY1_TETTH 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small GTP-binding protein 1.309e-17
Putative C-terminus
sp_v3.0_unigene161477 SustainPine v3.0 420
AutoFact: Probable GTPase Rab7 protein n=2 Tax=Ustilaginaceae RepID=E6ZRR6_9BASI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related protein Rab7 1.187e-12
N-terminus
sp_v3.0_unigene161590 SustainPine v3.0 296
AutoFact: Rop4 small GTP binding protein n=8 Tax=Embryophyta RepID=Q9XF08_MAIZE 6.0e-07
FL-Next: tr=Rac-like GTP binding protein; Picea mariana (Black spruce) (Abies mariana). 0.0
Sma3: Rac gtpase, putative 2.354e-08
Putative C-terminus
sp_v3.0_unigene161962 SustainPine v3.0 322
AutoFact: Small GTPase n=4 Tax=Dictyosteliida RepID=D3BQR0_POLPA 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene162934 SustainPine v3.0 371
AutoFact: Rab7 (Fragment) n=1 Tax=Tetrahymena thermophila RepID=Q9U5G8_TETTH 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related protein Rab7 8.134e-20
N-terminus
sp_v3.0_unigene163144 SustainPine v3.0 288
AutoFact: cullin 3B [Arabidopsis thaliana] sp|Q9C9L0.1|CUL3B_ARATH RecName: Full=Cullin-3B; Short=AtCUL3b gb|AAG52544.1|AC013289_11 putative cullin; 66460-68733 [Arabidopsis thaliana] gb|AEE34961.1| cullin 3B [Arabidopsis thaliana] 5.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene164693 SustainPine v3.0 241
AutoFact: putative GTP-binding protein [Gossypium hirsutum] 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related protein Rab11A 5.723e-15
Internal
sp_v3.0_unigene164784 SustainPine v3.0 273
AutoFact: Ras-related protein RABG3b n=2 Tax=Arabidopsis RepID=RAG3B_ARATH 6.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related protein Rab7 8.23e-13
N-terminus
sp_v3.0_unigene164988 SustainPine v3.0 177
AutoFact: RAN [Nicotiana sylvestris] gb|AAT40987.1| RAN [Nicotiana sylvestris] 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 5.848e-08
N-terminus
sp_v3.0_unigene166120 SustainPine v3.0 422
AutoFact: ethylene-responsive small GTP-binding protein [Oryza sativa Japonica Group] 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rab8/RabE-family small GTPase 8.27e-11
Putative C-terminus
sp_v3.0_unigene166321 SustainPine v3.0 413
AutoFact: Rab-type small GTP-binding protein n=3 Tax=Agaricomycetidae RepID=Q4G2I9_PAXIN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small GTP-binding protein 4.758e-17
Putative N-terminus
sp_v3.0_unigene166483 SustainPine v3.0 216
AutoFact: cullin 3B [Arabidopsis thaliana] sp|Q9C9L0.1|CUL3B_ARATH RecName: Full=Cullin-3B; Short=AtCUL3b gb|AAG52544.1|AC013289_11 putative cullin; 66460-68733 [Arabidopsis thaliana] gb|AEE34961.1| cullin 3B [Arabidopsis thaliana] 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene166920 SustainPine v3.0 155
AutoFact: Ras-related protein Rab7 n=5 Tax=Agaricales RepID=Q870G4_LENED 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related protein Rab7 7.896e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain