Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ubiquitin-conjugating enzyme/RWD-like

Term: IPR016135  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene80058 SustainPine v3.0 180
• AutoFact: putative helicase [Oryza sativa Japonica Group] 2.0e-24
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative RNA helicase A 3.02e-11
Internal
sp_v3.0_unigene80223 SustainPine v3.0 293
• AutoFact: Ubiquitin-conjugating enzyme E2 variant 1D n=24 Tax=Magnoliophyta RepID=UEV1D_ARATH 1.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-conjugating enzyme, putative 1.328e-08
N-terminus
sp_v3.0_unigene80419 SustainPine v3.0 218
• AutoFact: Ubiquitin carrier protein n=1 Tax=Schizophyllum commune H4-8 RepID=D8QFI2_SCHCM 4.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 5.502e-38
Putative N-terminus
sp_v3.0_unigene80793 SustainPine v3.0 189
• AutoFact: Ubiquitin carrier protein (Fragment) n=1 Tax=Leucoagaricus gongylophorus RepID=E7D8R0_LEUGO 8.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 2.423e-27
C-terminus
sp_v3.0_unigene81688 SustainPine v3.0 395
• AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=A9NKP2_PICSI 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 6.056e-17
Internal
sp_v3.0_unigene97240 SustainPine v3.0 478
• AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=D5ABW6_PICSI 6.99949e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Putative N-terminus
sp_v3.0_unigene100416 SustainPine v3.0 1089
• AutoFact: Ubiquitin carrier protein n=13 Tax=Tracheophyta RepID=Q69JN7_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene102098 SustainPine v3.0 615
• AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent RNA helicase, putative 3.728e-16
Putative N-terminus
sp_v3.0_unigene103572 SustainPine v3.0 720
• AutoFact: Ubiquitin-conjugating enzyme E2-23 kDa n=2 Tax=Triticeae RepID=UBC4_WHEAT 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 6.704e-26
C-terminus
sp_v3.0_unigene104106 SustainPine v3.0 262
• AutoFact: Probable ubiquitin-conjugating enzyme E2 23 n=2 Tax=Arabidopsis RepID=UBC23_ARATH 5.0e-26
• FL-Next: sp=Probable ubiquitin-conjugating enzyme E2 23; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene107002 SustainPine v3.0 270
• AutoFact: GCN2-type protein kinase n=1 Tax=Triticum aestivum RepID=F4NAR5_WHEAT 8.0e-25
• FL-Next: sp=Probable serine/threonine-protein kinase GCN2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene107134 SustainPine v3.0 356
• AutoFact: Eif2alpha kinase, putative n=1 Tax=Ricinus communis RepID=B9T5C5_RICCO 2.0e-38
• FL-Next: sp=Probable serine/threonine-protein kinase GCN2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene108514 SustainPine v3.0 427
• AutoFact: Putative ATP-dependent RNA helicase n=1 Tax=Oryza sativa RepID=Q9FW67_ORYSA 0.0
• FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ATP-dependent RNA helicase, putative 2.923e-18
Internal
sp_v3.0_unigene116075 SustainPine v3.0 536
• AutoFact: Ubiquitin carrier protein (Fragment) n=1 Tax=Leucoagaricus gongylophorus RepID=E7D8R0_LEUGO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene120908 SustainPine v3.0 237
• AutoFact: protein kinase like [Arabidopsis thaliana] 6.0e-18
• FL-Next: sp=Probable serine/threonine-protein kinase GCN2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene121886 SustainPine v3.0 549
• AutoFact: Eif2alpha kinase, putative n=1 Tax=Ricinus communis RepID=B9T5C5_RICCO 0.0
• FL-Next: tr=Mitogen activated protein kinase 13; Pinus taeda (Loblolly pine). 0.0
Internal
sp_v3.0_unigene123058 SustainPine v3.0 209
• AutoFact: X8 domain containing protein 4.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene126678 SustainPine v3.0 1262
• AutoFact: Ubiquitin-conjugating enzyme 13, E2 n=3 Tax=Embryophyta RepID=D8QMV8_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene126692 SustainPine v3.0 625
• AutoFact: MMS ZWEI-like protein 4, E2 n=2 Tax=Selaginella moellendorffii RepID=D8SCX0_SELML 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-conjugating enzyme, putative 1.501e-09
C-terminus
sp_v3.0_unigene126730 SustainPine v3.0 742
• AutoFact: Ubiquitin carrier protein n=13 Tax=Tracheophyta RepID=Q69JN7_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain