Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ligases, Forming carbon-nitrogen bonds, Acid--D-amino-acid ligases (peptide synthases).

Term: EC:6.3.2.-  Help

Source: EC from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene64780 SustainPine v3.0 204
• AutoFact: E3 ubiquitin-protein ligase SINAT5 n=1 Tax=Arabidopsis thaliana RepID=SINA5_ARATH 4.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_203, whole genome shotgun sequence 1.173e-08
Internal
sp_v3.0_unigene64895 SustainPine v3.0 292
• AutoFact: Ubiquitin-conjugating enzyme E2, putative n=1 Tax=Ricinus communis RepID=B9RIN0_RICCO 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Putative Complete
sp_v3.0_unigene65769 SustainPine v3.0 152
• AutoFact: Unassigned protein
• FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene65869 SustainPine v3.0 172
• AutoFact: Ubiquitin carrier protein n=3 Tax=Poaceae RepID=Q6YUS2_ORYSJ 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 6.127e-35
Putative N-terminus
sp_v3.0_unigene66831 SustainPine v3.0 461
• AutoFact: Auxin responsive GH3-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZF61_PICSI 0.0
• FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: GH3 family protein 8.21e-24
C-terminus
sp_v3.0_unigene68541 SustainPine v3.0 198
• AutoFact: Auxin responsive GH3-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZF61_PICSI 8.0e-22
• FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: GH3 family protein 9.867e-14
Putative C-terminus
sp_v3.0_unigene68930 SustainPine v3.0 132
• AutoFact: Ubiquitin carrier protein n=1 Tax=Populus trichocarpa RepID=B9HDK6_POPTR 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 3.08286e-44
C-terminus
sp_v3.0_unigene69260 SustainPine v3.0 293
• AutoFact: Ubiquitin carrier protein n=2 Tax=Picea sitchensis RepID=B8LR70_PICSI 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 4.718e-13
Putative N-terminus
sp_v3.0_unigene70136 SustainPine v3.0 332
• AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=D5ABW6_PICSI 6.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.991e-22
C-terminus
sp_v3.0_unigene71512 SustainPine v3.0 340
• AutoFact: Ubiquitin-conjugating enzyme E2-23 kDa n=2 Tax=Triticeae RepID=UBC4_WHEAT 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.25e-27
Putative C-terminus
sp_v3.0_unigene71600 SustainPine v3.0 159
• AutoFact: ubiquitin ligase SINAT5-related (seven in absentia protein family) [Musa balbisiana] 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SINA6 1.1e-07
Internal
sp_v3.0_unigene71703 SustainPine v3.0 240
• AutoFact: indole-3-acetic acid-amido synthetase GH3.6 [Arabidopsis thaliana] sp|Q9LSQ4.1|GH36_ARATH RecName: Full=Indole-3-acetic acid-amido synthetase GH3.6; AltName: Full=Auxin-responsive GH3-like protein 6; Short=AtGH3-6; AltName: Full=Protein DWARF IN LIGHT 1; 5.0e-24
• FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: GH3 family protein 1.176e-23
Internal
sp_v3.0_unigene72093 SustainPine v3.0 413
• AutoFact: indole-3-acetic acid-amido synthetase GH3.5 [Arabidopsis thaliana] sp|O81829.1|GH35_ARATH RecName: Full=Indole-3-acetic acid-amido synthetase GH3.5; AltName: Full=Auxin-responsive GH3-like protein 5; Short=AtGH3-5 emb|CAA19720.1| GH3 like protein [Arabido 0.0
• FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: GH3 family protein 4.586e-23
Internal
sp_v3.0_unigene72292 SustainPine v3.0 304
• AutoFact: Ubiquitin-conjugating enzyme E2-23 kDa n=2 Tax=Triticeae RepID=UBC4_WHEAT 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.25e-27
Putative C-terminus
sp_v3.0_unigene72796 SustainPine v3.0 156
• AutoFact: Ubiquitin carrier protein (Fragment) n=2 Tax=Magnoliophyta RepID=Q677E9_HYAOR 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 2.542e-19
Internal
sp_v3.0_unigene73096 SustainPine v3.0 273
• AutoFact: similar to eukaryotic protein kinase domains (Pfam: pkinase.hmm, score: 171.43) [Arabidopsis thaliana] 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin ligase 6.094e-16
Internal
sp_v3.0_unigene74055 SustainPine v3.0 267
• AutoFact: Ubiquitin carrier protein n=2 Tax=Picea sitchensis RepID=B8LMJ5_PICSI 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.4013e-45
Internal
sp_v3.0_unigene74200 SustainPine v3.0 391
• AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=A9NTD0_PICSI 4.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 3.512e-07
Putative C-terminus
sp_v3.0_unigene74667 SustainPine v3.0 350
• AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=D5ABW6_PICSI 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
C-terminus
sp_v3.0_unigene74775 SustainPine v3.0 336
• AutoFact: Ubiquitin carrier protein n=1 Tax=Schizophyllum commune H4-8 RepID=D8QFI2_SCHCM 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 3.998e-40
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain