Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thiamine biosynthetic process

Term: GO:0009228  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene64883 SustainPine v3.0 213
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene65049 SustainPine v3.0 159
AutoFact: thiazole biosynthetic enzyme [Pseudotsuga menziesii var. menziesii] 7.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thiazole biosynthetic enzyme, chloroplastic 5.294e-13
Internal
sp_v3.0_unigene65146 SustainPine v3.0 133
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 4.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene66735 SustainPine v3.0 384
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RMS1_RICCO 7.0e-28
FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Putative N-terminus
sp_v3.0_unigene67028 SustainPine v3.0 363
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V0_PICAB 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene67386 SustainPine v3.0 285
AutoFact: Probable pyridoxal biosynthesis protein PDX1 n=2 Tax=Spermatophyta RepID=PDX1_GINBI 7.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Probable pyridoxal biosynthesis protein PDX1 8.081e-09
C-terminus
sp_v3.0_unigene68550 SustainPine v3.0 286
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene68895 SustainPine v3.0 189
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Chromosome chr4 scaffold_32, whole genome shotgun sequence 7.861e-06
Internal
sp_v3.0_unigene69467 SustainPine v3.0 264
AutoFact: thiamine biosynthesis protein ThiC [Flavobacterium psychrophilum JIP02/86] emb|CAL42539.1| Thiamine biosynthesis protein ThiC [Flavobacterium psychrophilum JIP02/86] 1.0e-22
FL-Next: sp=Phosphomethylpyrimidine synthase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative thiamin biosynthesis protein 1.426e-09
Internal
sp_v3.0_unigene71332 SustainPine v3.0 362
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Putative C-terminus
sp_v3.0_unigene74314 SustainPine v3.0 390
AutoFact: thiamine-phosphate pyrophosphorylase [Arabidopsis thaliana] gb|AAV97808.1| At1g22940 [Arabidopsis thaliana] gb|AEE30313.1| thiamine-phosphate pyrophosphorylase [Arabidopsis thaliana] 1.0e-16
FL-Next: tr=BTH1; Brassica napus (Rape). 0.0
Internal
sp_v3.0_unigene74988 SustainPine v3.0 148
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g57430, chloroplastic; Flags: Precursor gb|AEE79654.1| pentatricopeptide repeat-containing protein [Ara 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene75587 SustainPine v3.0 204
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Lepidogyna hodgsoniae RepID=B3U1Z4_9MARC 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene75936 SustainPine v3.0 345
AutoFact: hydroxyethylthiazole kinase [Arabidopsis thaliana] dbj|BAB03021.1| hydoxyethylthiazole kinase-like protein [Arabidopsis thaliana] gb|AAQ62427.1| At3g24030 [Arabidopsis thaliana] dbj|BAD43718.1| putative hydoxyethylthiazole kinase [Arabidopsis thaliana] gb 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene76905 SustainPine v3.0 237
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Lepidogyna hodgsoniae RepID=B3U1Z5_9MARC 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene79848 SustainPine v3.0 295
AutoFact: 1-deoxy-D-xylulose 5-phosphate synthase type II n=1 Tax=Picea abies RepID=A7LA02_PICAB 5.0e-28
FL-Next: tr=1-deoxy-D-xylulose 5-phosphate synthase type II; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: 1-deoxy-D-xylulose 5-phosphate synthase 3.757e-30
Internal
sp_v3.0_unigene83626 SustainPine v3.0 263
coding
sp_v3.0_unigene95908 SustainPine v3.0 926
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 7.015e-22
C-terminus
sp_v3.0_unigene95971 SustainPine v3.0 1458
AutoFact: putative thiamin biosynthesis protein [Oryza sativa Japonica Group] 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene105973 SustainPine v3.0 220
AutoFact: Thi4 multi-domain protein 1.0e-07
coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain