Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: zinc ion binding

Term: GO:0008270  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1796 SustainPine v3.0 1187
AutoFact: U1 snRNP-interacting 70 kDa protein [Triticum aestivum] 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U1 small nuclear ribonucleoprotein 5.633e-12
Complete
sp_v3.0_unigene1800 SustainPine v3.0 1028
AutoFact: RING/U-box domain-containing protein n=4 Tax=Arabidopsis RepID=F4JWA1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene1806 SustainPine v3.0 2512
AutoFact: Phototropic-responsive NPH3 protein [Arabidopsis thaliana] sp|Q9FKB6.1|Y5880_ARATH RecName: Full=BTB/POZ domain-containing protein At5g48800 dbj|BAB09433.1| non-phototropic hypocotyl-like protein [Arabidopsis thaliana] gb|AED95726.1| Phototropic-responsiv 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transposon protein, putative, Mutator sub-class, expressed 3.312e-13
Complete
sp_v3.0_unigene1810 SustainPine v3.0 1955
AutoFact: putative poly (ADP-ribose) polymerase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Poly[ADP-ribose] synthetase 1 7.814e-13
Complete
sp_v3.0_unigene1814 SustainPine v3.0 2228
AutoFact: DnaJ protein-like [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chaperone protein DNAj, putative 1.041e-08
Complete
sp_v3.0_unigene1815 SustainPine v3.0 377
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBN7_RICCO 0.0
FL-Next: sp=Putative pumilio homolog 8, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pumilio-family RNA binding repeat containing protein, expressed 1.305e-11
Internal
sp_v3.0_unigene1816 SustainPine v3.0 1055
AutoFact: C2H2-type zinc finger-containing protein [Arabidopsis thaliana] gb|AAK76505.1| unknown protein [Arabidopsis thaliana] gb|AAD31578.2| expressed protein [Arabidopsis thaliana] gb|AAM14308.1| unknown protein [Arabidopsis thaliana] gb|AEC09323.1| C2H2-type zi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene1820 SustainPine v3.0 838
AutoFact: Drf_FH1 multi-domain protein 6.0e-18
coding
sp_v3.0_unigene1839 SustainPine v3.0 1682
AutoFact: Alcohol dehydrogenase (Fragment) n=7 Tax=Pinaceae RepID=Q43021_PINBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene1867 SustainPine v3.0 2649
AutoFact: FMN-linked oxidoreductase-like protein protein n=5 Tax=Arabidopsis RepID=Q8H128_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene1870 SustainPine v3.0 2573
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9T6X0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ring finger protein, putative 2.86e-13
Putative Complete
sp_v3.0_unigene1875 SustainPine v3.0 5252
AutoFact: SNF2 family DNA-dependent ATPase (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TI22_PHYPA 0.0
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromatin remodeling complex subunit 1.086e-16
Complete
sp_v3.0_unigene1876 SustainPine v3.0 2292
AutoFact: TFIIB-related protein (Fragment) n=1 Tax=Spinacia oleracea RepID=Q93YB0_SPIOL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TFIIB-related protein 2.662e-13
C-terminus
sp_v3.0_unigene1879 SustainPine v3.0 3620
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TEH2_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Extensin 3.825e-13
Complete
sp_v3.0_unigene1887 SustainPine v3.0 2829
AutoFact: DNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SXI7_PHYPA 0.0
FL-Next: sp=DNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: DNA polymerase 1.099e-23
C-terminus
sp_v3.0_unigene1891 SustainPine v3.0 2694
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AAA-type ATPase family protein, putative, expressed 1.969e-07
Complete
sp_v3.0_unigene1905 SustainPine v3.0 2618
AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAA17156.1| hypothetical protein [Arabidopsis thaliana] emb|CAB79144.1| hypothetical protein [Arabidopsis thaliana] gb|AAX22254.1| At4g21890 [Arabidopsis thaliana] gb|ABF82621.1| At4g21890 [Arabidopsis th 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
C-terminus
sp_v3.0_unigene1906 SustainPine v3.0 2026
AutoFact: Arf gtpase-activating protein, putative n=1 Tax=Ricinus communis RepID=B9SNV8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rev interacting-like family protein, putative, expressed 1.431e-08
Complete
sp_v3.0_unigene1911 SustainPine v3.0 2927
AutoFact: Keratin_B2 multi-domain protein 1.0e-05
FL-Next: sp=NF-X1-type zinc finger protein NFXL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene1931 SustainPine v3.0 2020
AutoFact: contains similarity to human DHHC-domain-containing cysteine-rich protein (GB:U90653) and several S. cerevisiae probable membrane proteins (GB:U20865, Z48758, U43491) [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain