Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Nucleotide-binding, alpha-beta plait

Term: IPR012677  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3310 SustainPine v3.0 1621
AutoFact: Ribonucleoprotein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9RNK5_RICCO 7.00005e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene3321 SustainPine v3.0 605
AutoFact: FAP multi-domain protein 5.0e-20
Sma3: Glycine-rich protein 5.632e-13
coding
sp_v3.0_unigene3322 SustainPine v3.0 3591
AutoFact: RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gb|AEE76829.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene3396 SustainPine v3.0 3887
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAD23688.1| expressed protein [Arabidopsis thaliana] gb|AAL24108.1| unknown protein [Arabidopsis thaliana] gb|AAO22811.1| unknown protein [Arabidopsis thaliana] gb|AEC07178.1| RNA recognit 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene3398 SustainPine v3.0 996
AutoFact: Plastidic phosphate translocator-like protein1 n=1 Tax=Mesembryanthemum crystallinum RepID=Q59IV6_MESCR 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Plastidic phosphate translocator-like protein1 4.196e-11
C-terminus
sp_v3.0_unigene3514 SustainPine v3.0 2902
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7W6_RICCO 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein 18; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene3544 SustainPine v3.0 1209
AutoFact: Nuclear cap-binding protein subunit 2 n=3 Tax=Andropogoneae RepID=B6TL33_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene3673 SustainPine v3.0 1889
AutoFact: H/ACA ribonucleoprotein complex subunit 4 [Arabidopsis thaliana] sp|Q9LD90.1|DKC1_ARATH RecName: Full=H/ACA ribonucleoprotein complex subunit 4; AltName: Full=Nopp-140-associated protein of 57 kDa homolog; Short=AtNAP57; AltName: Full=Nucleolar protein NA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Centromere/microtubule binding protein cbf5, putative 4.506e-08
Complete
sp_v3.0_unigene3688 SustainPine v3.0 1919
AutoFact: PREDICTED: RNA-binding protein 41-like [Monodelphis domestica] 2.0e-29
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Putative uncharacterized protein At1g09230 3.411e-06
Putative Complete
sp_v3.0_unigene3697 SustainPine v3.0 1544
AutoFact: Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Picea sitchensis RepID=A9NNT0_PICSI 0.0
FL-Next: sp=Eukaryotic translation initiation factor 3 subunit G; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene3703 SustainPine v3.0 2623
AutoFact: putative U2-associated SR140 protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene3718 SustainPine v3.0 1983
AutoFact: bidirectional amino acid transporter 1 [Arabidopsis thaliana] gb|AAB71542.1| putative amino acid or GABA permease [Arabidopsis thaliana] gb|AAD14517.2| putative amino acid or GABA permease [Arabidopsis thaliana] gb|AEC05409.1| bidirectional amino acid tra 0.0
FL-Next: sp=Amino-acid permease BAT1 homolog; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Putative GABA-specific permease 1.363e-19
Complete
sp_v3.0_unigene3866 SustainPine v3.0 2230
AutoFact: Heterogeneous nuclear ribonucleoprotein A3-like protein 2 n=3 Tax=Andropogoneae RepID=B6TV58_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene3910 SustainPine v3.0 1812
AutoFact: putative beta-1,3-galactosyltransferase 9 [Arabidopsis thaliana] sp|Q5XEZ1.1|B3GT9_ARATH RecName: Full=Probable beta-1,3-galactosyltransferase 9 gb|AAU94388.1| At2g25300 [Arabidopsis thaliana] gb|AAW50705.1| At2g25300 [Arabidopsis thaliana] gb|AEC07684.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-1,3-galactosyltransferase sqv-2, putative 9.598e-23
Putative Complete
sp_v3.0_unigene3964 SustainPine v3.0 2411
AutoFact: Mitochondrial respiratory chain complexes assembly protein AFG3, putative (EC:3.6.4.3); K08956 AFG3 family protein [EC:3.4.24.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protease ftsH homolog 1.848e-13
C-terminus
sp_v3.0_unigene3979 SustainPine v3.0 2366
AutoFact: RHO guanyl-nucleotide exchange factor 7 [Arabidopsis thaliana] emb|CAB82974.1| putative protein [Arabidopsis thaliana] gb|AAU94394.1| At5g02010 [Arabidopsis thaliana] gb|AAV59279.1| At5g02010 [Arabidopsis thaliana] gb|AED90419.1| RHO guanyl-nucleotide exc 0.0
FL-Next: sp=Rop guanine nucleotide exchange factor 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Rop guanine nucleotide exchange factor, putative 1.006e-22
C-terminus
sp_v3.0_unigene4000 SustainPine v3.0 1366
AutoFact: Ribosomal RNA adenine dimethylase family protein [Arabidopsis thaliana] gb|AAC09322.1| dimethyladenosine transferase [Arabidopsis thaliana] dbj|BAC42078.1| putative dimethyladenosine transferase [Arabidopsis thaliana] gb|AAO50630.1| putative dimethyladeno 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dimethyladenosine transferase 9.276e-09
Complete
sp_v3.0_unigene4038 SustainPine v3.0 3403
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] gb|AED97923.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Cell division protein ftsH, putative 1.894e-14
Complete
sp_v3.0_unigene4147 SustainPine v3.0 835
AutoFact: HIV Tat-specific factor 1 [Arabidopsis thaliana] emb|CAC01867.1| putative protein [Arabidopsis thaliana] gb|AAY25436.1| At5g16260 [Arabidopsis thaliana] dbj|BAF01062.1| hypothetical protein [Arabidopsis thaliana] gb|AED92266.1| HIV Tat-specific factor 1 [ 6.99949e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene4229 SustainPine v3.0 2453
AutoFact: DUF1777 multi-domain protein 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U2 snRNP auxiliary factor large subunit B 1.38e-15
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain