Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: WD40 repeat

Term: IPR001680  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2942 SustainPine v3.0 892
AutoFact: STYLOSA protein n=1 Tax=Antirrhinum majus RepID=Q6H976_ANTMA 0.0
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Transcriptional corepressor LEUNIG 4.872e-08
Internal
sp_v3.0_unigene2968 SustainPine v3.0 2520
AutoFact: protein FIZZY-related 3 [Arabidopsis thaliana] ref|NP_001190305.1| protein FIZZY-related 3 [Arabidopsis thaliana] sp|Q8LPL5.1|FZR3_ARATH RecName: Full=Protein FIZZY-RELATED 3; AltName: Full=Cell cycle switch protein CCS52B gb|AAM20433.1| cell cycle switch 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene2971 SustainPine v3.0 899
AutoFact: WD40 repeat-containing protein [Dictyostelium discoideum AX4] sp|Q55FJ2.1|WDR91_DICDI RecName: Full=WD repeat-containing protein 91 homolog gb|EAL73495.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4] 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene3051 SustainPine v3.0 3021
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAC41980.1| unknown protein [Arabidopsis thaliana] gb|AAO64896.1| At4g34280 [Arabidopsis thaliana] gb|AEE86354.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene3060 SustainPine v3.0 2515
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RJH4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene3061 SustainPine v3.0 1807
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAC27402.2| expressed protein [Arabidopsis thaliana] gb|AAM65204.1| unknown [Arabidopsis thaliana] dbj|BAC42145.1| unknown protein [Arabidopsis thaliana] gb|AAO63858.1| putative G-protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene3215 SustainPine v3.0 494
AutoFact: Cleavage stimulation factor 50 kDa subunit, putative n=1 Tax=Ricinus communis RepID=B9RLL1_RICCO 5.0e-29
FL-Next: tr=Cleavage stimulation factor 50 kDa subunit, putative; Ricinus communis (Castor bean). 0.0
Sma3: Putative cleavage stimulation factor subunit 1 4.061e-09
C-terminus
sp_v3.0_unigene3251 SustainPine v3.0 1289
AutoFact: Anaphase-promoting complex subunit, putative n=1 Tax=Ricinus communis RepID=B9SFA8_RICCO 0.0
FL-Next: sp=Anaphase-promoting complex subunit 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Anaphase-promoting complex subunit, putative 3.411e-06
C-terminus
sp_v3.0_unigene3254 SustainPine v3.0 2783
AutoFact: Zinc finger CCCH domain-containing protein 17 n=4 Tax=Oryza sativa RepID=C3H17_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_139, whole genome shotgun sequence 9.727e-13
Complete
sp_v3.0_unigene3414 SustainPine v3.0 2227
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] ref|NP_001190666.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAM20586.1| putative WD-repeat protein [Arabidopsis thaliana] gb|AAN15676.1| putative WD-repeat protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LEC14B protein, putative 5.167e-09
Complete
sp_v3.0_unigene3437 SustainPine v3.0 2302
AutoFact: syntaxin binding protein 5 (tomosyn) [Arabidopsis thaliana] dbj|BAB11546.1| unnamed protein product [Arabidopsis thaliana] gb|AED90890.1| syntaxin binding protein 5 (tomosyn) [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene3548 SustainPine v3.0 905
AutoFact: STYLOSA protein n=1 Tax=Antirrhinum majus RepID=Q6H976_ANTMA 0.0
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene3687 SustainPine v3.0 1648
AutoFact: protein transport SEC13-like protein [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene3735 SustainPine v3.0 3987
AutoFact: [R] COG2319 FOG: WD40 repeat 9.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene3756 SustainPine v3.0 1939
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAF76355.1| hypothetical protein [Arabidopsis thaliana] gb|AAO42310.1| unknown protein [Arabidopsis thaliana] gb|AAP04120.1| unknown protein [Arabidopsis thaliana] gb|AEE74922.1| transduc 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene3768 SustainPine v3.0 1257
AutoFact: Phosphorylase-like protein protein [Arabidopsis thaliana] gb|AEE85565.1| Phosphorylase-like protein protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mta/sah nucleosidase, putative 1.399e-07
Complete
sp_v3.0_unigene3769 SustainPine v3.0 1291
AutoFact: Phosphorylase-like protein protein [Arabidopsis thaliana] gb|AEE85565.1| Phosphorylase-like protein protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene3858 SustainPine v3.0 2673
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene3897 SustainPine v3.0 2293
AutoFact: cell cycle switch protein CCS52A [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division cycle, putative 1.066e-09
Complete
sp_v3.0_unigene3917 SustainPine v3.0 2018
AutoFact: RNA export 1 [Nicotiana benthamiana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain