Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: WD40/YVTN repeat-like-containing domain

Term: IPR015943  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene6604 SustainPine v3.0 1906
AutoFact: DUF1777 multi-domain protein 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Predicted protein 0.0
C-terminus
sp_v3.0_unigene6690 SustainPine v3.0 2575
AutoFact: defective in exine formation [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
C-terminus
sp_v3.0_unigene6710 SustainPine v3.0 1956
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T1Y8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleotide binding protein 9.523e-07
Complete
sp_v3.0_unigene6929 SustainPine v3.0 1492
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK76712.1| unknown protein [Arabidopsis thaliana] gb|AAM45004.1| unknown protein [Arabidopsis thaliana] gb|AED97944.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr9 scaffold_7, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene6930 SustainPine v3.0 2015
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAK50091.1|AF372951_1 At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AAN72242.1| At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AEE36064.1| transducin/WD-40 repeat-containing protein [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein-like 2.587e-13
Putative Complete
sp_v3.0_unigene7040 SustainPine v3.0 2284
AutoFact: O-FucT domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative auxin-independent growth promoter 1.982e-29
Complete
sp_v3.0_unigene7271 SustainPine v3.0 1649
AutoFact: THO complex subunit 6 [Arabidopsis thaliana] sp|Q8L4M1.1|DWA1_ARATH RecName: Full=WD repeat-containing protein DWA1; AltName: Full=Protein DWD HYPERSENSITIVE TO ABA 1 gb|AAM20569.1| putative WD-40 repeat protein [Arabidopsis thaliana] gb|AAM91279.1| putat 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative WD-40 repeat protein 1.586e-07
Complete
sp_v3.0_unigene7284 SustainPine v3.0 1750
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAM13156.1| unknown protein [Arabidopsis thaliana] gb|AAN15609.1| unknown protein [Arabidopsis thaliana] gb|AEE29984.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=WD repeat-containing protein DWA2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Transducin / WD-40 repeat protein-like 3.048e-08
Complete
sp_v3.0_unigene7350 SustainPine v3.0 2245
AutoFact: [R] COG2319 FOG: WD40 repeat 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene7392 SustainPine v3.0 1218
AutoFact: Spotted leaf protein, putative n=1 Tax=Ricinus communis RepID=B9R8N3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin ligase PUB14, putative 1.534e-09
N-terminus
sp_v3.0_unigene7490 SustainPine v3.0 1000
AutoFact: Unassigned protein
FL-Next: sp=DDB1- and CUL4-associated factor homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene7587 SustainPine v3.0 808
AutoFact: WD40 repeat protein [Ipomoea purpurea] dbj|BAE94399.1| WD40 repeat protein [Ipomoea nil] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD40 repeat protein 2.399e-16
Putative N-terminus
sp_v3.0_unigene7842 SustainPine v3.0 1961
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S4H8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene7937 SustainPine v3.0 837
AutoFact: U-box domain-containing protein 9 [Arabidopsis thaliana] sp|Q9SRT0.1|PUB9_ARATH RecName: Full=U-box domain-containing protein 9; AltName: Full=Plant U-box protein 9 gb|AAF02146.1|AC009853_6 hypothetical protein [Arabidopsis thaliana] gb|AAL91644.1| AT3g07 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Spotted leaf protein 11 3.017e-07
Putative N-terminus
sp_v3.0_unigene7991 SustainPine v3.0 2201
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T1Y8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleotide binding protein 8.948e-07
Complete
sp_v3.0_unigene8059 SustainPine v3.0 2129
AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene8124 SustainPine v3.0 2208
AutoFact: O-FucT domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative auxin-independent growth promoter 1.485e-25
C-terminus
sp_v3.0_unigene8143 SustainPine v3.0 1460
AutoFact: WD-40 repeat-containing protein [Nostoc sp. PCC 7120] dbj|BAB77807.1| WD-40 repeat protein [Nostoc sp. PCC 7120] 6.0e-12
FL-Next: sp=Outer row dynein assembly protein 16; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Sma3: Putative uncharacterized protein OJ1789_C07.22 9.747e-06
C-terminus
sp_v3.0_unigene8161 SustainPine v3.0 2820
AutoFact: Unassigned protein
FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Sma3: Chromosome chr13 scaffold_210, whole genome shotgun sequence 1.873e-07
Putative Complete
sp_v3.0_unigene8229 SustainPine v3.0 1565
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAC27402.2| expressed protein [Arabidopsis thaliana] gb|AAM65204.1| unknown [Arabidopsis thaliana] dbj|BAC42145.1| unknown protein [Arabidopsis thaliana] gb|AAO63858.1| putative G-protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain