Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: WD40/YVTN repeat-like-containing domain

Term: IPR015943  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene5403 SustainPine v3.0 1578
AutoFact: Prp8 binding protein [Arabidopsis thaliana] gb|AAB64029.1| putative splicing factor [Arabidopsis thaliana] gb|AAM13181.1| putative splicing factor [Arabidopsis thaliana] gb|AAP68267.1| At2g43770 [Arabidopsis thaliana] gb|AEC10322.1| Prp8 binding protein [ 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr5 scaffold_72, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene5451 SustainPine v3.0 3283
AutoFact: phospholipase A-2-activating protein [Arabidopsis thaliana] gb|AAK95297.1|AF410311_1 AT3g18860/MCB22_3 [Arabidopsis thaliana] dbj|BAB03095.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76160.1| phospholipase A-2-activating protein [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene5509 SustainPine v3.0 1993
AutoFact: defective in exine formation [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene5561 SustainPine v3.0 4957
AutoFact: coatomer subunit alpha-1 [Arabidopsis thaliana] sp|Q94A40.2|COPA1_ARATH RecName: Full=Coatomer subunit alpha-1; AltName: Full=Alpha-coat protein 1; Short=Alpha-COP 1 gb|AAC28519.1| Strong similarity to coatamer alpha subunit (HEPCOP) homolog gb|U24105 fro 0.0
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome undetermined scaffold_840, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene5633 SustainPine v3.0 2378
AutoFact: F-box and wd40 domain protein, putative n=1 Tax=Ricinus communis RepID=B9S6L1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene5756 SustainPine v3.0 2592
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAA77766.1| FAS2 [Arabidopsis thaliana] dbj|BAB11430.1| FAS2 [Arabidopsis thaliana] gb|AED97930.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: FAS2 3.801e-09
Complete
sp_v3.0_unigene5786 SustainPine v3.0 2373
AutoFact: GTP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SRI2_RICCO 0.0
FL-Next: sp=Dynamin-like protein ARC5; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene5843 SustainPine v3.0 895
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAE44475.1| WD repeat protein [Arabidopsis thaliana] gb|AEE85686.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene5899 SustainPine v3.0 1943
AutoFact: WD repeat and SOF domain-containing protein 1 [Arabidopsis thaliana] gb|AAK50083.1|AF372943_1 AT4g28450/F20O9_130 [Arabidopsis thaliana] gb|AAK73982.1| AT4g28450/F20O9_130 [Arabidopsis thaliana] gb|AAN28840.1| At4g28450/F20O9_130 [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SOF1 protein-like protein 4.17e-09
Complete
sp_v3.0_unigene5967 SustainPine v3.0 1639
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
C-terminus
sp_v3.0_unigene6085 SustainPine v3.0 2440
AutoFact: Cell division cycle, putative n=1 Tax=Ricinus communis RepID=B9S1Y4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division cycle, putative 1.19e-09
C-terminus
sp_v3.0_unigene6174 SustainPine v3.0 2076
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDD1_RICCO 0.0
FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Complete
sp_v3.0_unigene6245 SustainPine v3.0 1552
AutoFact: Unassigned protein
FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Sma3: Chromosome undetermined scaffold_245, whole genome shotgun sequence 6.198e-08
Internal
sp_v3.0_unigene6268 SustainPine v3.0 1352
AutoFact: [R] COG2319 FOG: WD40 repeat 0.0
FL-Next: tr=Autophagy-related protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Complete
sp_v3.0_unigene6305 SustainPine v3.0 1408
AutoFact: WD-repeat protein 4 n=3 Tax=Andropogoneae RepID=B6TK73_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene6310 SustainPine v3.0 1402
AutoFact: WD repeat-containing protein 5 [Danio rerio] gb|AAH52124.1| Wdr5 protein [Danio rerio] gb|AAH66729.1| Wdr5 protein [Danio rerio] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene6314 SustainPine v3.0 1353
AutoFact: Neurobeachin, putative n=1 Tax=Ricinus communis RepID=B9RZY6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6410 SustainPine v3.0 2335
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6495 SustainPine v3.0 1431
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK50098.1|AF372960_1 AT3g15470/MJK13_13 [Arabidopsis thaliana] gb|AAF35413.1| unknown protein [Arabidopsis thaliana] dbj|BAB02376.1| WD-40 repeat protein-like [Arabidopsis thaliana] gb|A 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene6542 SustainPine v3.0 2209
AutoFact: breast carcinoma amplified sequence 3-like protein [Oryza sativa Japonica Group] 3.0e-20
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain