Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein catabolic process

Term: GO:0030163  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene156521 SustainPine v3.0 206
AutoFact: Proteasome regulatory particle subunit Rpt5 n=5 Tax=Sordariomycetes RepID=A4QT56_MAGO7 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative 26S proteasome AAA-ATPase subunit RPT6a 3.087e-08
Internal
sp_v3.0_unigene156940 SustainPine v3.0 317
AutoFact: 26S proteasome regulatory subunit IV [Syntrichia ruralis] 1.0e-14
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Complete
sp_v3.0_unigene157122 SustainPine v3.0 440
AutoFact: Clp protease adaptor protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8IQY8_CHLRE 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent Clp protease adaptor protein ClpS containing protein 4.503e-09
C-terminus
sp_v3.0_unigene158504 SustainPine v3.0 353
AutoFact: AAA ATPase domain-containing protein n=1 Tax=Polysphondylium pallidum RepID=D3BKR2_POLPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division cycle protein 48 1.285e-11
Internal
sp_v3.0_unigene158751 SustainPine v3.0 336
AutoFact: PREDICTED: similar to Psmc6 protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E490DB 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 26S proteasome AAA-ATPase subunit RPT4a 2.505e-08
C-terminus
sp_v3.0_unigene158768 SustainPine v3.0 378
AutoFact: 26S proteasome regulatory subunit 4, putative n=6 Tax=Plasmodium RepID=Q8IJW0_PLAF7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasomal ATPase 1.865e-13
Internal
sp_v3.0_unigene159043 SustainPine v3.0 202
AutoFact: TAT-binding protein 1 (Fragment) n=2 Tax=Euteleostomi RepID=Q9DFE8_ONCMY 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene159105 SustainPine v3.0 222
AutoFact: 26S protease regulatory subunit 8 n=1 Tax=Ictalurus punctatus RepID=E3TEF6_ICTPU 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasomal ATPase 4.741e-14
Internal
sp_v3.0_unigene159263 SustainPine v3.0 367
AutoFact: 26S proteasome-associated pad1 homolog variant (Fragment) n=7 Tax=Tetrapoda RepID=Q59G89_HUMAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 26S proteasome regulatory subunit 5.771e-07
Putative C-terminus
sp_v3.0_unigene159315 SustainPine v3.0 303
AutoFact: 26S proteasome non-ATPase regulatory subunit 14 n=27 Tax=Chordata RepID=PSDE_HUMAN 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 26S proteasome regulatory subunit 3.191e-10
N-terminus
sp_v3.0_unigene167455 SustainPine v3.0 287
AutoFact: 26S proteasome regulatory subunit 8 n=3 Tax=Spermatophyta RepID=Q9M613_PINTA 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasomal ATPase 1.615e-14
Internal
sp_v3.0_unigene167784 SustainPine v3.0 274
AutoFact: Mitochondrial respiratory chain complexes assembly protein AFG3, putative n=1 Tax=Ricinus communis RepID=B9SYC0_RICCO 3.0e-14
FL-Next: sp=ATP-dependent zinc metalloprotease FTSH 3, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cell division protease ftsH homolog 3, mitochondrial 1.649e-08
Misassembled
sp_v3.0_unigene168253 SustainPine v3.0 174
AutoFact: cell division protein [Guillardia theta] sp|O78516.1|FTSH_GUITH RecName: Full=ATP-dependent zinc metalloprotease FtsH gb|AAC35738.1| hypothetical chloroplast RF25 [Guillardia theta] 9.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protease ftsH homolog 1.872e-14
Internal
sp_v3.0_unigene184544 SustainPine v3.0 558
AutoFact: 26S protease regulatory subunit 8 n=7 Tax=Eukaryota RepID=F4W633_9HYME 0.0
FL-Next: tr=26S proteasome regulatory subunit 8; Pinus taeda (Loblolly pine). 0.0
Sma3: Proteasomal ATPase 2.993e-14
C-terminus
sp_v3.0_unigene188342 SustainPine v3.0 242
AutoFact: Aaa-metalloprotease chloroplast n=1 Tax=Micromonas sp. RCC299 RepID=C1FDU0_MICSR 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protease ftsH homolog 8.829e-16
Internal
sp_v3.0_unigene190180 SustainPine v3.0 414
AutoFact: 26S protease regulatory subunit 6B homolog n=4 Tax=Dictyosteliida RepID=PRS6B_DICDI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasomal ATPase 3.911e-14
Putative C-terminus
sp_v3.0_unigene193165 SustainPine v3.0 426
AutoFact: PREDICTED: COP9 constitutive photomorphogenic homolog subunit 2-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBA118 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COP9 signalosome complex subunit 2 5.08e-13
Putative C-terminus
sp_v3.0_unigene193893 SustainPine v3.0 199
AutoFact: Protease Do-like 1, chloroplastic n=2 Tax=Arabidopsis RepID=DEGP1_ARATH 6.0e-09
FL-Next: sp=Protease Do-like 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene199664 SustainPine v3.0 398
AutoFact: 26S proteasome non-ATPase regulatory subunit 14 n=27 Tax=Chordata RepID=PSDE_HUMAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 26S proteasome regulatory subunit 7.483e-07
Internal
sp_v3.0_unigene200968 SustainPine v3.0 291
AutoFact: AAA-type ATPase family protein n=1 Tax=Arabidopsis thaliana RepID=B3H533_ARATH 7.00649e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasomal ATPase 5.335e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain