Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein catabolic process

Term: GO:0030163  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene60867 SustainPine v3.0 148
AutoFact: putative proteasome regulatory subunit [Arabidopsis thaliana] emb|CAB79392.1| putative proteasome regulatory subunit [Arabidopsis thaliana] 8.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 26S proteasome subunit RPN7 1.214e-09
Internal
sp_v3.0_unigene61083 SustainPine v3.0 140
AutoFact: 26S proteasome subunit 11 (Fragment) n=1 Tax=Platanus x acerifolia RepID=Q1M303_PLAAC 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene61858 SustainPine v3.0 141
AutoFact: 26S protease regulatory subunit 6a, putative n=2 Tax=Magnoliophyta RepID=B9RFB5_RICCO 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TAT-binding protein homolog 1 3.58e-08
Internal
sp_v3.0_unigene62819 SustainPine v3.0 238
AutoFact: Similarity to 26S proteasome subunit 4 n=2 Tax=Arabidopsis thaliana RepID=Q9LIM2_ARATH 6.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bromodomain protein 3.642e-08
Internal
sp_v3.0_unigene63111 SustainPine v3.0 279
AutoFact: 26S protease regulatory subunit 6B homolog n=13 Tax=Embryophyta RepID=PRS6B_ARATH 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 26S protease regulatory subunit 6B homolog 4.556e-09
Internal
sp_v3.0_unigene63743 SustainPine v3.0 181
AutoFact: 26S proteasome AAA-ATPase subunit RPT1a [Arabidopsis thaliana] 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65480 SustainPine v3.0 364
AutoFact: E3 ubiquitin-protein ligase KEG [Arabidopsis thaliana] sp|Q9FY48.2|KEG_ARATH RecName: Full=E3 ubiquitin-protein ligase KEG; AltName: Full=Protein KEEP ON GOING; AltName: Full=RING finger protein KEG gb|ABC46683.1| RING E3 ligase protein [Arabidopsis thali 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: 26S proteasome non-ATPase regulatory subunit 14 9.67e-09
Complete
sp_v3.0_unigene65615 SustainPine v3.0 286
AutoFact: AAA ATPase; 26S proteasome subunit P45 [Medicago truncatula] gb|ABN08912.1| AAA ATPase; 26S proteasome subunit P45 [Medicago truncatula] 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene65662 SustainPine v3.0 260
AutoFact: 26S proteasome regulatory subunit 8 n=3 Tax=Spermatophyta RepID=Q9M613_PINTA 4.0e-31
FL-Next: tr=26S proteasome regulatory subunit 8; Pinus taeda (Loblolly pine). 0.0
Sma3: Putative 26S proteasome AAA-ATPase subunit RPT6a 6.427e-09
Internal
sp_v3.0_unigene65817 SustainPine v3.0 204
AutoFact: rice homologue of Tat binding protein [Oryza sativa Japonica Group] 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65835 SustainPine v3.0 184
AutoFact: 26S proteasome regulatory subunit 8 n=3 Tax=Spermatophyta RepID=Q9M613_PINTA 1.0e-18
FL-Next: tr=26S proteasome regulatory subunit 8; Pinus taeda (Loblolly pine). 0.0
Sma3: Proteasomal ATPase 4.191e-08
Internal
sp_v3.0_unigene65934 SustainPine v3.0 139
AutoFact: probable 26S proteasome regulatory subunit [Larix decidua] gb|ABA81910.1| probable 26S proteasome regulatory subunit [Larix kaempferi] gb|ABA81911.1| probable 26S proteasome regulatory subunit [Larix sibirica] gb|ABA81912.1| probable 26S proteasome regula 9.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 26S proteasome subunit RPN7 1.463e-09
Putative C-terminus
sp_v3.0_unigene65963 SustainPine v3.0 133
AutoFact: 26S protease regulatory subunit 6a, putative n=2 Tax=Magnoliophyta RepID=B9RFB5_RICCO 9.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene68143 SustainPine v3.0 362
AutoFact: 26S proteasome regulatory subunit 4 homolog A n=26 Tax=Embryophyta RepID=PRS4A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 26S proteasome regulatory subunit 6.301e-13
Putative C-terminus
sp_v3.0_unigene68365 SustainPine v3.0 169
AutoFact: 26S proteasome regulatory subunit n=2 Tax=Chlamydomonadales RepID=A8IV67_CHLRE 7.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene72262 SustainPine v3.0 202
AutoFact: Immunodeficiency virus Tat binding protein 1 (Fragment) n=1 Tax=Brassica rapa RepID=Q39407_BRACM 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene73116 SustainPine v3.0 133
AutoFact: Protease degQ, putative n=1 Tax=Ricinus communis RepID=B9SF71_RICCO 1.0e-08
FL-Next: sp=Protease Do-like 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene73876 SustainPine v3.0 208
AutoFact: FtsH-like protein (Fragment) n=17 Tax=Triticeae RepID=Q6DVR3_HORSP 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protease ftsH homolog 2.935e-13
Internal
sp_v3.0_unigene75454 SustainPine v3.0 158
AutoFact: 26S proteasome regulatory complex, ATPase RPT4 n=3 Tax=Agaricales RepID=B0CU44_LACBS 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasomal ATPase 2.463e-13
Internal
sp_v3.0_unigene76790 SustainPine v3.0 273
AutoFact: Cell division protein ftsh (Fragment) n=1 Tax=Oryza sativa Indica Group RepID=A6MZA7_ORYSI 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative zinc dependent protease 1.991e-08
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain