Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ATPase, AAA-type, core

Term: IPR003959  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene41130 SustainPine v3.0 236
• AutoFact: peroxisome biogenesis protein PEX1 [Arabidopsis thaliana] 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division cycle protein 48 homolog 7.622e-11
Internal
sp_v3.0_unigene41543 SustainPine v3.0 294
• AutoFact: AAA-type ATPase family protein n=2 Tax=Arabidopsis thaliana RepID=F4JRP0_ARATH 1.0e-34
• FL-Next: tr=AAA-type ATPase family protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Replication factor C / DNA polymerase III gamma-tau subunit, putative 6.345e-07
Internal
sp_v3.0_unigene42662 SustainPine v3.0 309
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative C-terminus
sp_v3.0_unigene42819 SustainPine v3.0 3367
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic 0.0
Complete
sp_v3.0_unigene42985 SustainPine v3.0 1017
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RUJ6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 3.334e-15
N-terminus
sp_v3.0_unigene43319 SustainPine v3.0 188
• AutoFact: peroxisome biogenesis protein PEX1 [Arabidopsis thaliana] 8.0e-06
• FL-Next: sp=Peroxisome biogenesis protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene43639 SustainPine v3.0 239
• AutoFact: Peroxisome assembly factor-2, putative n=1 Tax=Ricinus communis RepID=B9S3U3_RICCO 7.0e-08
• FL-Next: sp=Peroxisome biogenesis protein 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Peroxisome assembly factor-2, putative 7.797e-06
Internal
sp_v3.0_unigene43675 SustainPine v3.0 547
• AutoFact: peroxisome biogenesis protein PEX1 [Arabidopsis thaliana] 8.0e-08
• FL-Next: sp=Peroxisome biogenesis protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene44092 SustainPine v3.0 2913
• AutoFact: RecName: Full=Probable pleiotropic drug resistance protein 2 emb|CAD59566.1| PDR-like ABC transporter [Oryza sativa Japonica Group] tpg|DAA00885.1| TPA_exp: PDR2 ABC transporter [Oryza sativa (japonica cultivar-group)] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Complete
sp_v3.0_unigene44366 SustainPine v3.0 702
• AutoFact: ATP-dependent metalloprotease FtsH [Prosthecochloris aestuarii DSM 271] gb|ACF46797.1| ATP-dependent metalloprotease FtsH [Prosthecochloris aestuarii DSM 271] 6.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: FtsH6-Zea mays FtsH protease 1.576e-07
Internal
sp_v3.0_unigene44429 SustainPine v3.0 313
• AutoFact: RecName: Full=Pleiotropic drug resistance protein 1; AltName: Full=NpPDR1 emb|CAC40990.1| ABC1 protein [Nicotiana plumbaginifolia] 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Internal
sp_v3.0_unigene44956 SustainPine v3.0 350
• AutoFact: Calmodulin-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RU57_RICCO 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nuclear AAA ATPase (VCP subfamily) (ISS) 1.093e-08
Internal
sp_v3.0_unigene45001 SustainPine v3.0 151
• AutoFact: Pleiotropic drug resistance protein 2 n=1 Tax=Nicotiana plumbaginifolia RepID=PDR2_NICPL 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Internal
sp_v3.0_unigene45847 SustainPine v3.0 290
• AutoFact: Pleiotropic drug resistance protein n=1 Tax=Cucumis sativus RepID=C8CA12_CUCSA 8.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Internal
sp_v3.0_unigene46022 SustainPine v3.0 1483
• AutoFact: Bromodomain protein n=2 Tax=Populus trichocarpa RepID=B9HH62_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division cycle protein 48 homolog 6.038e-11
Putative C-terminus
sp_v3.0_unigene46295 SustainPine v3.0 523
• AutoFact: [L] COG0470 ATPase involved in DNA replication 4.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene46407 SustainPine v3.0 217
• AutoFact: [O] COG0464 ATPases of the AAA+ class 9.0e-09
• FL-Next: sp=Pachytene checkpoint protein 2 homolog; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene46478 SustainPine v3.0 251
• AutoFact: AAA-type ATPase-like protein [Arabidopsis thaliana] gb|AAF82285.1|AF264023_1 STICHEL [Arabidopsis thaliana] gb|AAC18938.2| similar to prokaryotic DNA polymerase III gamma subunit [Arabidopsis thaliana] gb|AEC05585.1| AAA-type ATPase-like protein [Arabidop 1.0e-16
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: Replication factor C / DNA polymerase III gamma-tau subunit, putative 7.309e-14
Internal
sp_v3.0_unigene46697 SustainPine v3.0 2558
• AutoFact: bromodomain protein 103 [Zea mays] gb|AAN41251.1| bromodomain protein 103 [Zea mays] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Bromodomain protein 2.005e-10
C-terminus
sp_v3.0_unigene47116 SustainPine v3.0 147
• AutoFact: cell division control protein 48-B [Arabidopsis thaliana] sp|Q9ZPR1.1|CD48B_ARATH RecName: Full=Cell division control protein 48 homolog B; Short=AtCDC48b gb|AAD20084.1| putative AAA-type ATPase [Arabidopsis thaliana] gb|AAL32521.1| putative AAA-type ATPa 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain