Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tetratricopeptide repeat-containing domain

Term: IPR013026  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene20524 SustainPine v3.0 1414
AutoFact: aldo/keto reductase family protein [Arabidopsis thaliana] dbj|BAB11492.1| aldose reductase-like protein [Arabidopsis thaliana] gb|AAY78879.1| aldo/keto reductase family protein [Arabidopsis thaliana] gb|AED97606.1| aldo/keto reductase family protein [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Aldo-keto reductase, putative 2.168e-33
Complete
sp_v3.0_unigene20637 SustainPine v3.0 533
AutoFact: adenine nucleotide alpha hydrolases-like protein [Arabidopsis thaliana] gb|AAF26101.1|AC012328_4 unknown protein [Arabidopsis thaliana] gb|AEE73920.1| adenine nucleotide alpha hydrolases-like protein [Arabidopsis thaliana] 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: USP family protein 1.41e-14
C-terminus
sp_v3.0_unigene20745 SustainPine v3.0 689
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Picea sitchensis RepID=A9NLD0_PICSI 3.0e-26
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 1.70958e-43
C-terminus
sp_v3.0_unigene21388 SustainPine v3.0 990
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AED92812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 8.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene21462 SustainPine v3.0 857
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene21778 SustainPine v3.0 477
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene21925 SustainPine v3.0 3064
AutoFact: putative pre-mRNA splicing factor [Oryza sativa Japonica Group] gb|AAP54456.1| U5 snRNP-associated 102 kDa protein, putative, expressed [Oryza sativa Japonica Group] gb|EAY79087.1| hypothetical protein OsI_34194 [Oryza sativa Indica Group] 0.0
FL-Next: sp=PsbB mRNA maturation factor Mbb1, chloroplastic; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene22263 SustainPine v3.0 770
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene22532 SustainPine v3.0 1817
AutoFact: Peptidyl-prolyl cis-trans isomerase CYP40 [Arabidopsis thaliana] sp|Q9C566.1|CYP40_ARATH RecName: Full=Peptidyl-prolyl cis-trans isomerase CYP40; Short=PPIase CYP40; AltName: Full=Cyclophilin of 40 kDa; Short=Cyclophilin-40; AltName: Full=Protein SQUINT; 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase CYP40; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene22614 SustainPine v3.0 881
AutoFact: GRP multi-domain protein 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene22671 SustainPine v3.0 737
AutoFact: Os06g0140800 protein n=3 Tax=Oryza sativa RepID=Q0DEQ5_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin ligase 9.787e-19
C-terminus
sp_v3.0_unigene22896 SustainPine v3.0 1411
AutoFact: Os10g0486900 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XD86_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene23276 SustainPine v3.0 719
AutoFact: Heat shock protein, HSP70, hsc70 n=1 Tax=Thalassiosira pseudonana RepID=B8C1V0_THAPS 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Luminal-binding protein 1 1.218e-08
Putative C-terminus
sp_v3.0_unigene23545 SustainPine v3.0 1845
AutoFact: E3 ubiquitin-protein ligase CHIP [Arabidopsis thaliana] sp|Q9SRS9.1|CHIP_ARATH RecName: Full=E3 ubiquitin-protein ligase CHIP; AltName: Full=Carboxyl terminus of HSC70-interacting protein; Short=AtCHIP; AltName: Full=Plant U-box protein 61; AltName: Full= 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: STIP1 homology and U box-containing protein 1 8.801e-09
Complete
sp_v3.0_unigene23591 SustainPine v3.0 1525
AutoFact: TPR repeat-containing protein [Synechococcus sp. JA-3-3Ab] gb|ABD00149.1| tetratricopeptide repeat protein [Synechococcus sp. JA-3-3Ab] 4.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene23632 SustainPine v3.0 482
AutoFact: FK506-binding protein 2 n=1 Tax=Yarrowia lipolytica CLIB122 RepID=FKBP2_YARLI 3.0e-34
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase, FKBP-type 1.385e-18
Putative Complete
sp_v3.0_unigene23950 SustainPine v3.0 3402
AutoFact: cohesin-load domain-containing protein [Arabidopsis thaliana] dbj|BAB09745.1| unnamed protein product [Arabidopsis thaliana] gb|AED96068.1| cohesin-load domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene24345 SustainPine v3.0 3499
AutoFact: Kinesin light chain, putative n=1 Tax=Ricinus communis RepID=B9RB32_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene24714 SustainPine v3.0 2663
AutoFact: putative receptor protein kinase [Arabidopsis thaliana] dbj|BAB09644.1| protein kinase-like protein [Arabidopsis thaliana] gb|AAL91617.1| AT5g59010/k19m22_210 [Arabidopsis thaliana] gb|ABH04487.1| At5g59010 [Arabidopsis thaliana] gb|AED97129.1| putative r 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Receptor protein kinase, putative 1.97e-20
Complete
sp_v3.0_unigene25034 SustainPine v3.0 1854
AutoFact: Peptidyl-prolyl cis-trans isomerase d, ppid, putative n=1 Tax=Ricinus communis RepID=B9S777_RICCO 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus taeda (Loblolly pine). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain