Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tetratricopeptide repeat-containing domain

Term: IPR013026  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene11402 SustainPine v3.0 2296
AutoFact: Peptidylprolyl isomerase, putative n=2 Tax=Ricinus communis RepID=B9T7Z2_RICCO 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase FKBP62; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase, FKBP-type 8.926e-18
Complete
sp_v3.0_unigene11652 SustainPine v3.0 1786
AutoFact: peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis thaliana] gb|AAM13295.1| peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis thaliana] 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene12377 SustainPine v3.0 707
AutoFact: tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] ref|NP_173210.3| tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] gb|AAN86156.1| unknown protein [Arabidopsis thaliana] gb|AEE29620.1| tetratricopeptide repea 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene12416 SustainPine v3.0 601
AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] dbj|BAC43219.1| unknown protein [Arabidopsis thaliana] gb|AAP37677.1| At1g78915 [Arabidopsis thaliana] gb|AEE36174.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] 5.0e-29
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene12421 SustainPine v3.0 4331
AutoFact: pfam12807, eIF3_p135, Translation initiation factor eIF3 subunit 135 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 3 subunit, putative 5.076e-07
Complete
sp_v3.0_unigene12447 SustainPine v3.0 3319
AutoFact: Mitogen activated protein kinase kinase kinase-like protein [Arabidopsis thaliana] ref|NP_850718.1| Mitogen activated protein kinase kinase kinase-like protein [Arabidopsis thaliana] gb|AAK83572.1| AT3g58640/F14P22_230 [Arabidopsis thaliana] gb|AAM98106.1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Map3k delta-1 protein kinase, putative 2.923e-22
Complete
sp_v3.0_unigene12621 SustainPine v3.0 461
AutoFact: DnaJ-domain-containing protein [Arabidopsis thaliana] gb|AEE74457.1| DnaJ-domain-containing protein [Arabidopsis thaliana] 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene12885 SustainPine v3.0 606
AutoFact: Fk506 binding protein, putative n=1 Tax=Ricinus communis RepID=B9RQ36_RICCO 5.0e-16
FL-Next: sp=Outer envelope protein 61, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene12902 SustainPine v3.0 810
AutoFact: anaphase-promoting complex subunit 6 [Arabidopsis thaliana] sp|B3DNN5.1|CDC16_ARATH RecName: Full=Anaphase-promoting complex subunit 6; AltName: Full=Cell division cycle protein 16 homolog; Short=CDC16 homolog; AltName: Full=Cyclosome subunit 6; AltName: 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene12934 SustainPine v3.0 955
AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] dbj|BAB10514.1| unnamed protein product [Arabidopsis thaliana] gb|AED92407.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Anaphase-promoting complex subunit 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene12976 SustainPine v3.0 1698
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene13040 SustainPine v3.0 3405
AutoFact: DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] sp|Q9FNM7.2|RH26_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 26 gb|AED91329.1| DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 31 4.022e-08
Complete
sp_v3.0_unigene13051 SustainPine v3.0 982
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] emb|CAB62650.1| MS5-like protein [Arabidopsis thaliana] gb|AAP21246.1| At3g51280 [Arabidopsis thaliana] dbj|BAE99956.1| MS5 like protein [Arabidopsis thaliana] gb|AEE78773.1| tetrat 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pollenless3 1.129e-11
N-terminus
sp_v3.0_unigene13211 SustainPine v3.0 946
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene13508 SustainPine v3.0 1214
AutoFact: adenine nucleotide alpha hydrolase domain-containing protein kinase [Arabidopsis thaliana] gb|ABE65860.1| protein kinase family protein [Arabidopsis thaliana] gb|AEC07567.1| adenine nucleotide alpha hydrolase domain-containing protein kinase [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin ligase 3.773e-18
Putative C-terminus
sp_v3.0_unigene13575 SustainPine v3.0 1114
AutoFact: XPA-binding protein, putative; K12867 pre-mRNA-splicing factor SYF1 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene13737 SustainPine v3.0 3300
AutoFact: Mitogen activated protein kinase kinase kinase-like protein [Arabidopsis thaliana] ref|NP_850718.1| Mitogen activated protein kinase kinase kinase-like protein [Arabidopsis thaliana] gb|AAK83572.1| AT3g58640/F14P22_230 [Arabidopsis thaliana] gb|AAM98106.1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Map3k delta-1 protein kinase, putative 4.114e-22
Complete
sp_v3.0_unigene14019 SustainPine v3.0 930
AutoFact: gametophytic factor 2 [Arabidopsis thaliana] dbj|BAC43188.1| putative DnaJ protein [Arabidopsis thaliana] gb|AED95612.1| gametophytic factor 2 [Arabidopsis thaliana] 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DnaJ protein-like 6.122e-07
N-terminus
sp_v3.0_unigene14069 SustainPine v3.0 615
AutoFact: Calcium-binding tetratricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q8S8L9.1|Y2245_ARATH RecName: Full=Uncharacterized TPR repeat-containing protein At2g32450 gb|AAM15073.1| putative O-GlcNAc transferase [Arabidopsis thaliana] gb|AAO4224 9.99967e-42
FL-Next: sp=Uncharacterized TPR repeat-containing protein At2g32450; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene14115 SustainPine v3.0 863
AutoFact: Cryptochrome DASH, chloroplastic/mitochondrial n=4 Tax=Oryza sativa RepID=CRYD_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cryptochrome DASH, chloroplastic/mitochondrial 1.825e-16
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain