Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleosome assembly

Term: GO:0006334  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene191849 SustainPine v3.0 425
AutoFact: PREDICTED: histone H3.3C-like n=1 Tax=Meleagris gallopavo RepID=UPI000203517A 2.0e-21
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
C-terminus
sp_v3.0_unigene192313 SustainPine v3.0 475
AutoFact: Histone H3 n=1 Tax=Ostreococcus tauri RepID=Q00YS0_OSTTA 0.0
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene192331 SustainPine v3.0 345
AutoFact: Histone H3 n=1 Tax=Oryza sativa Japonica Group RepID=C7J3T3_ORYSJ 5.0e-40
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
C-terminus
sp_v3.0_unigene192348 SustainPine v3.0 298
AutoFact: Histone H2A, orphon n=108 Tax=Bilateria RepID=H2AO_CHITH 2.0e-23
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative N-terminus
sp_v3.0_unigene192464 SustainPine v3.0 411
AutoFact: Histone H2B n=1 Tax=Moneuplotes crassus RepID=H2B_EUPCR 7.0e-39
FL-Next: sp=Histone H2B; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 5.226e-37
C-terminus
sp_v3.0_unigene192908 SustainPine v3.0 347
AutoFact: PREDICTED: histone H2A.x-like n=1 Tax=Nomascus leucogenys RepID=UPI00020A9FF3 2.0e-19
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene195046 SustainPine v3.0 241
AutoFact: nucleosome chromatin assembly protein [Oryza sativa Indica Group] 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 1.428e-10
Putative N-terminus
sp_v3.0_unigene195133 SustainPine v3.0 181
Sma3: Histone H2B 3.961e-18
unknown
sp_v3.0_unigene200345 SustainPine v3.0 505
AutoFact: Histone H2B n=2 Tax=Salpingoeca sp. ATCC 50818 RepID=F2UPD5_9EUKA 2.0e-33
FL-Next: sp=Histone H2B; Olisthodiscus luteus (Marine phytoflagellate) (Heterosigma akashiwo). 0.0
Sma3: Histone H2B 1.211e-38
Complete
sp_v3.0_unigene201951 SustainPine v3.0 846
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 9.99967e-42
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene203097 SustainPine v3.0 612
AutoFact: Histone H3 n=1 Tax=Ostreococcus tauri RepID=Q00YS0_OSTTA 4.06377e-44
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene203362 SustainPine v3.0 490
AutoFact: Histone H4 n=3 Tax=Fungi/Metazoa group RepID=B6HAB7_PENCW 1.0e-34
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H4 0.0
Complete
sp_v3.0_unigene203578 SustainPine v3.0 509
AutoFact: PREDICTED: histone H3-like n=1 Tax=Acyrthosiphon pisum RepID=UPI0002060975 0.0
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3.2 0.0
Complete
sp_v3.0_unigene204329 SustainPine v3.0 510
AutoFact: histone H4 [Hyacinthus orientalis] 2.0e-37
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H4 1.194e-11
Complete
sp_v3.0_unigene204524 SustainPine v3.0 513
AutoFact: Histone H2B n=1 Tax=Culex quinquefasciatus RepID=B0X774_CULQU 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 7.165e-34
Putative Complete
sp_v3.0_unigene204544 SustainPine v3.0 450
AutoFact: PREDICTED: histone H4 replacement-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CB9ED1 1.0e-36
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H4 0.0
Complete
sp_v3.0_unigene204556 SustainPine v3.0 443
AutoFact: PREDICTED: histone H3.2-like n=1 Tax=Monodelphis domestica RepID=UPI00020F6110 1.4013e-45
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
C-terminus
sp_v3.0_unigene204575 SustainPine v3.0 500
AutoFact: HC2 multi-domain protein 1.0e-19
Sma3: Histone H1 8.168e-36
coding
sp_v3.0_unigene204677 SustainPine v3.0 506
AutoFact: Histone H3 n=35 Tax=Intramacronucleata RepID=H31_TETPY 0.0
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
Putative Complete
sp_v3.0_unigene204694 SustainPine v3.0 331
AutoFact: Histone H3 n=1 Tax=Ostreococcus tauri RepID=Q018N5_OSTTA 4.0e-20
FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H3 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain